Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01140 ATGTCGGTCTCCTGCTCCAACTGCCTCCCCGATTCCTTACTTCTCTGCGGCGAGGACTCCTCCGGAGTCTTGTCAGGAGAATCGCCGGGATGTTCCTCCGACCTCGATTCCTCGCCGCCGTCGGAGGAGGATTCCATCGCCGGATTCATCGAAGACGAACGACACTTCGTTCCCGGATTCGAATACCTCAACAGGTTCCAATCTCGCTCTCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTCCAGGCTTGTTACGCTTTTCAACCGCTCACGGCTTATCTATCCGTTAATTACATGGATCGATTCTTGAATTCTAGAACGTTGCCGCAAACCAATGGGTGGCCATTCCAACTTCTATCAGTTGCGTGCTTGTCTTTGGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCACTGTTGGACCTTCAGGTAGAAGGTGCCAAATACCTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTGCTTGTGCTGAGCGTCTTGGATTGGAGGCTAAGATCGGTTACTCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACGCAAATTATCTTATCTAATATTCAAGAGGCTAGTTTTCTTGCCTATTGGCCATCATGCATTGCTGTAGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGACCCGAGGATGCGGAGTCGTGGTGCGAGGGGCTAATAAAGGAGAAAATTATAGGATGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAACCCCCTAAAGTGTTACCGCAGCTGCGAGTGACATCTCGGCCCCTTCTAAGATCTAGTGTCTCGTCATTCTCAGCATCATCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGAAACTCCCAGTGA 1005 0.4816 MSVSCSNCLPDSLLLCGEDSSGVLSGESPGCSSDLDSSPPSEEDSIAGFIEDERHFVPGFEYLNRFQSRSLDASAREESVAWILKVQACYAFQPLTAYLSVNYMDRFLNSRTLPQTNGWPFQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYLFEPRTIRRMELLVLSVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAVAAILHAANEIPNWSLVRPEDAESWCEGLIKEKIIGCYQLMQELVIDNNRRKPPKVLPQLRVTSRPLLRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01140 334 SMART Cyclin_C_2 178 305 IPR004367 -
Phac2g01140 334 Pfam Cyclin, N-terminal domain 47 175 IPR006671 -
Phac2g01140 334 Gene3D - 59 176 - -
Phac2g01140 334 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Phac2g01140 334 SMART cyclin_7 81 169 IPR013763 -
Phac2g01140 334 PANTHER CYCLINS 51 275 IPR039361 -
Phac2g01140 334 Gene3D - 50 238 - -
Phac2g01140 334 SUPERFAMILY Cyclin-like 160 279 IPR036915 -
Phac2g01140 334 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Phac2g01140 334 SUPERFAMILY Cyclin-like 36 175 IPR036915 -
Phac2g01140 334 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
Phac2g01140 334 Pfam Cyclin, C-terminal domain 178 283 IPR004367 -
Phac2g01140 334 FunFam D2/4-type cyclin 59 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01140 Phac-Chr2 7853903 7857859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01140 1 334 Core Cell Cycle Gene Families AT1G70210 65.680 1.66e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01140 K18810 - gmx:100780369 549.28