Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01056 ATGGCTAACGAATCCTCGTCAAATGGGTCGTCTGTGTCGGATTCCATTTCGGCTCCGTTATCGTCCTCGTCGCTGCAGTCATCGGACGCAGAGTCTTCGCTACCCTCGAATCCGCCGCCGCCTTCACCGTCATCGCCGTTATCATCACCACCATCTCCGGAAAATTCTTCTCCTCCCACGACAACACCTCCGCCAGCGTCGGAAAACTCTCCTCCGCCGGTCCCGGAAAACTCCCCTCCGCCGCCAACTCCGTCTACTTCTCCACCACCAACTCCGTCTACTTCTCAACCACCAACTCCGTCTACTTCTCCACCACCAACTCCGTCTACTTCTCCACCACCTTCCCCTTCTCCGTCGCCACCAGCGTCAGTTCAATTTTCTCCCCCGCCAACACTTTCTCCGCCTCCTCCGTTAACTAACCCGCCATCAGAAGGTTCAAATCCACCACCTTCCCTGTCACCGCCGCCACCTTCACAACCATCACCATCGTCGCCACCTCCACAAAATTCACCTCCATTACCACAATCTTCTGATCCTCCTCCACAGTCCCTTTCGCCTCCAACTGTAACTACAACCCCACCTTCACCGGCTTCTTTTATTAGTCCGCCGCCGCTGCAGACAGCTTCAGCGTCACAGCCCCCTTCACAACTGCGATCAACACCAGGATTAACTCCGACTTTCAAACCAAAACAAAAGTCTGCTCCCCCGAAGAGCCACCCATCACCAAGCCCCTCCGGTAATAGTAATACAGGAGAAGTTGTTGGTCTTGCTCTCGCCGGGGTTTTCATCGTTGGCTTTATTGCTCTAGTTATTTTCTTTATATTCAGGAATAAGAATAAGCGAGCGAACATCTATGCCGTGCCACCCCCTAGGAAATCTCCTATGAGAGGAGCAGGAGCAGAAGGAGATGTACTTTACTATGTAGAGGAGCCTGGTTTTGGGAATGGAGCACAACAAGGTGGCATGCATATAAAATCTCCTTCAGATCCGGCTCTGAGCGGTGGTCAGTTAGTTTTTAGCTACGAAAAGATTGCGGAGATCACTAACGGGTTTTCCAGCGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCGCTTAAGACTTTGAAGGCTGGTAGTGGCCAGGGAGAACGGGAGTTCAGGTCTGAGGTCGACATCATCAGCAGAATCCATCATCGACATTTGGTTTCACTAATTGGTTATTGTATATCAGAACAGCAAAGAGTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCATGGAAGTGAATTGCCAATTTTGGATTGGTCCAAGAGGTTGAAGATAGCAATTGGTTCTGCAAGGGGCCTGTCATATCTTCATGATGGATGTAACCCAAAGATTATTCACAGAGATATTAAATCGGCAAACATTCTTTTGGATAATGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCAAGGCTAACCGACGATGCTAATACCCATGTATCAACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAAATCAGATATTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCGACGCAACCCTTAGGACAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTGCATGCAGTTCAGACAGGAGACTTTGGTCAACTAGTAGACCTTAGGCTTCAACAACAATACAATGAAAATGAAATGTTCAAAATGATTGAGGCAGCAGCAGCATGTGTTCGCCATTCTGCTCTAAAACGACCTAGTATGGTTCAGGTGATAAGAGCCTTAGACAACGGTGATCAACTACACGATCTATCAAATGGGGTGAGATATGGTCAGAGCACTATTTATAATTCTGGTCAGTATAATGAAGACATTGCAAGATTCAGAAAGATGGTTAATCCAAGCTTTGATGATTCCGAGTTTGATAACAACAGCTCGGAATTTCGTTCAACTGTTTCAAGAGGAAACGACTGA 2061 0.4789 MANESSSNGSSVSDSISAPLSSSSLQSSDAESSLPSNPPPPSPSSPLSSPPSPENSSPPTTTPPPASENSPPPVPENSPPPPTPSTSPPPTPSTSQPPTPSTSPPPTPSTSPPPSPSPSPPASVQFSPPPTLSPPPPLTNPPSEGSNPPPSLSPPPPSQPSPSSPPPQNSPPLPQSSDPPPQSLSPPTVTTTPPSPASFISPPPLQTASASQPPSQLRSTPGLTPTFKPKQKSAPPKSHPSPSPSGNSNTGEVVGLALAGVFIVGFIALVIFFIFRNKNKRANIYAVPPPRKSPMRGAGAEGDVLYYVEEPGFGNGAQQGGMHIKSPSDPALSGGQLVFSYEKIAEITNGFSSENIIGEGGFGYVYKASMPDGRVGALKTLKAGSGQGEREFRSEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLNQHLHGSELPILDWSKRLKIAIGSARGLSYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDKSDIFSFGVVLLELITGRKPVDPTQPLGQESLVEWARPLLLHAVQTGDFGQLVDLRLQQQYNENEMFKMIEAAAACVRHSALKRPSMVQVIRALDNGDQLHDLSNGVRYGQSTIYNSGQYNEDIARFRKMVNPSFDDSEFDNNSSEFRSTVSRGND* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01056 686 ProSiteProfiles Protein kinase domain profile. 351 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01056 686 Pfam Protein tyrosine and serine/threonine kinase 354 624 IPR001245 GO:0004672|GO:0006468
Phac2g01056 686 FunFam proline-rich receptor-like protein kinase PERK8 427 639 - -
Phac2g01056 686 MobiDBLite consensus disorder prediction 202 227 - -
Phac2g01056 686 CDD STKc_IRAK 357 626 - -
Phac2g01056 686 MobiDBLite consensus disorder prediction 1 33 - -
Phac2g01056 686 MobiDBLite consensus disorder prediction 1 249 - -
Phac2g01056 686 PRINTS Proline rich extensin signature 52 68 - -
Phac2g01056 686 PRINTS Proline rich extensin signature 69 86 - -
Phac2g01056 686 PRINTS Proline rich extensin signature 30 51 - -
Phac2g01056 686 PRINTS Proline rich extensin signature 88 113 - -
Phac2g01056 686 SMART serkin_6 351 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g01056 686 Gene3D Phosphorylase Kinase; domain 1 321 426 - -
Phac2g01056 686 MobiDBLite consensus disorder prediction 34 201 - -
Phac2g01056 686 MobiDBLite consensus disorder prediction 667 686 - -
Phac2g01056 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Phac2g01056 686 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 327 426 - -
Phac2g01056 686 Gene3D Transferase(Phosphotransferase) domain 1 427 639 - -
Phac2g01056 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 261 666 IPR047117 -
Phac2g01056 686 SUPERFAMILY Protein kinase-like (PK-like) 328 624 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01056 Phac-Chr2 7030104 7034590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01056 240 668 Trihelix Transcription Factor Family AT1G70460 57.965 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac2g01056 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01056 - - pvu:PHAVU_002G070900g 904.434