Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01039 ATGTCAACACTCAACCATCTTTTTGATCTTCCTGAACAGATATGTTACGTACAATGTGGATTCTGTACCACTATATTAATGGTAAGTGTCCCATGCAGCAGTTTGTCAATGGTGGTGACAGTAAGATGTGGGCACTGCACAAGCCTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTTAGTCATCTTGAGCCAAAAGAAAGTAGTCCAGAACAAGATGCTAACAAGACTTTGAACAGCCACAGTGCATCCCTGATGACCTTTTCTGATTGTGAGGAAGAGGATGTCATTCCAATGAGTAATATTGTGAATAAACCTCCAGAGAAGAGACAGCGAACGCCATCAGCTTATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAGAACCCTGACATGGCTCACAAAGAAGCTTTTAGTACAGCTGCAAAAAATTGGGCCAATTTTCCCCCAACTCAGTGCAAAGGAGATGATCAAGAGAGCTGTATCCAGACAGATCAACTTGTGGATCTTGACTCCCAAGTGGACCCTCCTGATGCTGAGGTCAATGAAGAAGATGGTCAAGGTTTCCGAGGAAGAAAGGTCCAGAGGAACTCCATCTTTGAAAGGACACCGTTTGAGTGA 654 0.4297 MSTLNHLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLSHLEPKESSPEQDANKTLNSHSASLMTFSDCEEEDVIPMSNIVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKGDDQESCIQTDQLVDLDSQVDPPDAEVNEEDGQGFRGRKVQRNSIFERTPFE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01039 217 SUPERFAMILY HMG-box 109 162 IPR036910 -
Phac2g01039 217 MobiDBLite consensus disorder prediction 182 217 - -
Phac2g01039 217 MobiDBLite consensus disorder prediction 194 210 - -
Phac2g01039 217 Gene3D High mobility group box domain 108 166 IPR036910 -
Phac2g01039 217 FunFam Axial regulator YABBY 4 108 175 - -
Phac2g01039 217 CDD HMG-box_SF 120 163 - -
Phac2g01039 217 Pfam YABBY protein 11 163 IPR006780 GO:0007275
Phac2g01039 217 PANTHER PROTEIN YABBY 6-RELATED 2 169 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01039 Phac-Chr2 6926451 6928402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01039 2 217 C2C2-YABBY Transcription Factor Family AT1G23420 60.352 1.12e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac2g01039 YABBY 1.3e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01039 K25796 - gmx:100804172 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01039 2 6926451 6928402 Phac2g01039 2 6926451 6928402 ECH