Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01028 ATGGTGATGGTCAAGATGGGCAATCAAAGGGTGAAGATCGTGAACTCAAGGATAGACTTTTACGTAAGTATGGGAGTCACATTGAAAAAGAAAGGTAAACTTCCGAAGGAAGCAAGGCAAACATTGCTTCAGTGGTGGAATGTTCACTACAAATGGCCTTACCCTACGGAAGCTGATAAGATTGAACTGGCTAAGTCTACAGGGTTAGATCAAAAGCAAATTAACAATTGGTTTATTAACCAAAGAAAACGTCATTGGAAACCATCCGAGAATATGCAGTTTTCCATGATGGAAAATCTTAACGGACGGTTCCTTGGAGAGGAATGA 327 0.4037 MVMVKMGNQRVKIVNSRIDFYVSMGVTLKKKGKLPKEARQTLLQWWNVHYKWPYPTEADKIELAKSTGLDQKQINNWFINQRKRHWKPSENMQFSMMENLNGRFLGEE* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01028 108 SMART HOX_1 27 92 IPR001356 GO:0003677
Phac2g01028 108 CDD homeodomain 29 89 IPR001356 GO:0003677
Phac2g01028 108 ProSiteProfiles 'Homeobox' domain profile. 25 88 IPR001356 GO:0003677
Phac2g01028 108 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Phac2g01028 108 SUPERFAMILY Homeodomain-like 29 97 IPR009057 -
Phac2g01028 108 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 30 96 - -
Phac2g01028 108 FunFam Homeobox protein knotted-1-like 2 30 92 - -
Phac2g01028 108 Pfam Homeobox KN domain 45 84 IPR008422 GO:0003677|GO:0006355
Phac2g01028 108 Gene3D - 26 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01028 Phac-Chr2 6721542 6722366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01028 34 108 Homeobox Transcription Factor Family AT1G23380 77.333 2.77e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac2g01028 Homeobox_KN 6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01028 - - gmx:100794719 173.326