Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00990 ATGAATACTTATTCACATGTTCCTCCTGGATTTCGTTTCCATCCCACCGATGAAGAACTTGTTCATTACTACCTTAAGAAAAAGGTAGCTTCTAAAAGGATTGACATAGATGTGATAAAAGATGTCGATCTCTATAAAATCGAGCCATGGGATCTTCAAGAATTATGCAAAAATGGAAGCCATGAACAAGATGAATGGTATTTCTTTAGTCATAAGGACAAGAAGTACCCAACAGGCACTCGTACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACTGGGAGAGACAAGGCAATTTACTGTAAGCATTGCCTTACTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCACCCAATGGACAGAAATCTGACTGGATCATGCATGAGTATCGACTAGAAACTAATGAAAATGGAACTCCTCAGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAAAAACGAATGACAACAGTGAGGAAAATGGGGGATTACGTGTCGCCATGTTGGTATGATGACCAAGTCTCGTTCATGCAAGAACTTGAATCTCCTATGCGAATTTCTAACCCTAATGCACCAAACCGTGACCCCTACCCCTGCAAGAAGGAGTTGGAATTGCAATTCAATATTCCCCATGACGCTTTTCTCCAACTTCCACAACTTGAAGGTCCCATAGTTCCTCAATCTGTGGCTAGTTTGAGTTTTAGCCCAGTTGTTTCTTACGGCTATGGTTGCAAGAACAACGGAAATGCTTTGCGGTCTTCGTCACTCACTCAAGAACATCGCCACCAACAAAGTCTGCAATTTCACTATGCTAGCAACGATCAATCTATGGACAATGTTATGGATTGGCGAGTACTTGACAAATTTGTGGCTAATCAGCTGAGTCACGATGAACATTTTTCCAATGTTGCTGAACAGATTAAGTTGCAAGCAAACGGATCTACAAAACCAGAAACTGGTCAGGAAATTGCTTCAACTTCCATCTCCAGTTGCCGATTGACCTGTGAAATGAAAATTTACAGCTAG 1035 0.4126 MNTYSHVPPGFRFHPTDEELVHYYLKKKVASKRIDIDVIKDVDLYKIEPWDLQELCKNGSHEQDEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYCKHCLTGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMTTVRKMGDYVSPCWYDDQVSFMQELESPMRISNPNAPNRDPYPCKKELELQFNIPHDAFLQLPQLEGPIVPQSVASLSFSPVVSYGYGCKNNGNALRSSSLTQEHRHQQSLQFHYASNDQSMDNVMDWRVLDKFVANQLSHDEHFSNVAEQIKLQANGSTKPETGQEIASTSISSCRLTCEMKIYS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00990 344 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Phac2g00990 344 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Phac2g00990 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 270 - -
Phac2g00990 344 FunFam NAC domain-containing protein 16 160 - -
Phac2g00990 344 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Phac2g00990 344 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00990 Phac-Chr2 6394664 6398212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00990 1 336 NAC Transcription Factor Family AT1G12260 54.667 2.71e-129 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g00990 NAM 5.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00990 - - gmx:100779370 542.732