Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00956 ATGGCTTCTCTTTCAGTAGTGCTCCTGGTCTTCACCTGTATATTCCATGCAACAACAGTGACGTCTACAACATACCACGACCGTACCTTCAAGACATTCTCTTCCGCCAACTTCTCCAAGAACCACCACTGGGTCGGACCCATCGGTCACCGTAAAATCACGGTTGACATTAACGGCGGTGGCCACTACCGCTCCGTTCAAGACGCCGTCAATGCCGTCCCCGACAACAACCGAAGGAATATCCTCATTCAAATCAACGCCGGATGCTACAAAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGCGCGGGTAAAGAAGTGACGGTGATAGAATGGCATGATCGAGCCAGTGACCCTGGTCCCAGTGGACAGCAACTGCGTACTTACAGAACCGCTTCCGTTACTGTTTTTGCCCCCTATTTTTCTGCCAGAAACATAAGCTTCAAGAACACGGCGCCTGCGCCAATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGCATATCCGGCGACAAGGCATACTTCTCCGGCTGCGGCTTCTACGGCGCACAGGACACACTTTGTGACGATGCTGGCCGACATTACTTCAAGGAATGCTACATTGAAGGATCCATCGATTTCATTTTTGGCAATGGCAGGTCCATGTACAAGGATTGCTGGCTACACTCAATAGCAACGAGGTTTGGGTCGATAGCAGCCCACGACAGAAAGCAGAAGGAGGAGAAGACAGGGTTTGCATTCGTAGGATGCAGGGTGACAGGTACAGGTCCACTGTACGTGGGACGAGCAATGGGACAGTACTCTAGAATCGTCTACTCCTACACATATTTCGATGACATTGTTGCACATGGTGGTTGGGATGATTGGGACCATGCCAACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGAGCAGGAGCAGAGGCTGTGCGTGGGGTCTCACTGGCACGAGACTTGGATTTTGAGACGGCTCATCCATTTATCAGAAAGAGTTTCGTCAATGGCAGACACTGGATCGCACCATCTGATGCTTAA 1065 0.5136 MASLSVVLLVFTCIFHATTVTSTTYHDRTFKTFSSANFSKNHHWVGPIGHRKITVDINGGGHYRSVQDAVNAVPDNNRRNILIQINAGCYKEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFAPYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIATRFGSIAAHDRKQKEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGAGAEAVRGVSLARDLDFETAHPFIRKSFVNGRHWIAPSDA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00956 354 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Phac2g00956 354 Gene3D - 49 353 IPR012334 -
Phac2g00956 354 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 350 - -
Phac2g00956 354 FunFam Pectinesterase 49 351 - -
Phac2g00956 354 Pfam Pectinesterase 53 345 IPR000070 GO:0030599|GO:0042545
Phac2g00956 354 SUPERFAMILY Pectin lyase-like 51 351 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00956 Phac-Chr2 6052987 6056065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00956 1 354 Carbohydrate Esterase AT5G47500 72.500 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00956 - - gmx:100816190 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00956 2 6052987 6056065 Phac2g00956 2 6052987 6056065 ECH