Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g00953 | ATGGAGCGCCACAAATGCAAGCTCTGTTCCAGAACATTCGCCAATGGCAGAGCCCTCGGTGGCCACATGAAGGCTCACTTAGCCACCCTTCCTCTTCCCCCCAAACCCCAACGTCTCCCTCACTCTCTTAATACTTTCTCTTCCAATTCCTCTTCACGTGAAGAGTTACAAGACGATGACAACGAAGAAGAAGATGAAGAAGAAGAAGAAGAAAAGGCTCTGATCAACTACGCCTTGCGAGAGAATCCCAAGAAATGCTTCAGGCTCGCAGATCCCGAGTTCGACTCGGGCTCTGTCGTGCAAGACAGGGAGAGCGAGACCGAGTCAAAGAACCCAACTCGCCGACGATCCAAGCGGCCACGCAGGCCCGCCAATTCCCAACCCAAAGCCCGGCCCAAACTCAGCTTCATGGAGTCCCCCGAGCCCGTAAGCTCCGTCTCCGACACTTCCCCCGAGGAAGATGTGGCCATGTGTCTCATGATGCTGTCCAGGGACCGGTGGAGCAAGAACAGCAACGTGGTTGTCGGCAACGACGTTGTCGAAGAGGAAGAAGAGAGATCAGTGGAAGAGATCAAGTTGAGGAGAGTTCGCCGGAAGCACCAGTGCGAGAGTTGCGAGAAGACGTTTCGATCTTCACGTGCATTGGGCAGTCACCGAAGCATCTGCGGAGGGTCGGGTAACGATAGTAAAATCTTCGAATGCCCCTTTTGTTCTAAGGTGTTTGGGTCTGGTCAAGCACTGGGTGGCCACAAGAGATCTCACCTGCTACCTTCTTCCTCCTCCACCGCGAATGATTCCACCAGGTTCAAAGACAGCTTCATAGATCTCAACTTGCCTGCTCCAACCGAAGAAGACGACCTCAGTGTTGTTTCTGATGCCCAATTCGATGACTAA | 894 | 0.5324 | MERHKCKLCSRTFANGRALGGHMKAHLATLPLPPKPQRLPHSLNTFSSNSSSREELQDDDNEEEDEEEEEEKALINYALRENPKKCFRLADPEFDSGSVVQDRESETESKNPTRRRSKRPRRPANSQPKARPKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNSNVVVGNDVVEEEEERSVEEIKLRRVRRKHQCESCEKTFRSSRALGSHRSICGGSGNDSKIFECPFCSKVFGSGQALGGHKRSHLLPSSSSTANDSTRFKDSFIDLNLPAPTEEDDLSVVSDAQFDD* | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g00953 | 297 | Gene3D | Classic Zinc Finger | 176 | 255 | - | - | |
Phac2g00953 | 297 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 295 | IPR044303 | GO:0006355 | |
Phac2g00953 | 297 | SMART | c2h2final6 | 200 | 220 | IPR013087 | - | |
Phac2g00953 | 297 | SMART | c2h2final6 | 232 | 254 | IPR013087 | - | |
Phac2g00953 | 297 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
Phac2g00953 | 297 | Pfam | C2H2-type zinc finger | 3 | 28 | - | - | |
Phac2g00953 | 297 | Pfam | C2H2-type zinc finger | 232 | 254 | - | - | |
Phac2g00953 | 297 | Pfam | C2H2-type zinc finger | 200 | 219 | - | - | |
Phac2g00953 | 297 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 234 | 254 | IPR013087 | - | |
Phac2g00953 | 297 | Coils | Coil | 179 | 199 | - | - | |
Phac2g00953 | 297 | MobiDBLite | consensus disorder prediction | 30 | 76 | - | - | |
Phac2g00953 | 297 | Coils | Coil | 49 | 73 | - | - | |
Phac2g00953 | 297 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 29 | IPR036236 | - | |
Phac2g00953 | 297 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
Phac2g00953 | 297 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
Phac2g00953 | 297 | MobiDBLite | consensus disorder prediction | 95 | 113 | - | - | |
Phac2g00953 | 297 | MobiDBLite | consensus disorder prediction | 95 | 150 | - | - | |
Phac2g00953 | 297 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 232 | 254 | IPR013087 | - | |
Phac2g00953 | 297 | SUPERFAMILY | beta-beta-alpha zinc fingers | 198 | 254 | IPR036236 | - | |
Phac2g00953 | 297 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g00953 | Phac-Chr2 | 6009707 | 6011726 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g00953 | 1 | 290 | C2H2 Transcription Factor Family | AT3G60580 | 37.309 | 4.16e-45 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac2g00953 | zf-C2H2_6 | 1.8e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g00953 | - | - | vun:114173003 | 476.863 |