Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00907 ATGGCACCCCAGAATAATGAAACACCCAAGAAAACTAACAACAGAGGAGCATGGACTGCGGAGGAAGATCAGAAGCTAGCCCAATGCATTGAAATTCACGGTGCAAAGAGGTGGAAAACTGTTGCAATTAAATCAGGTCTAAACAGATGCGGAAAAAGTTGCAGGCTGAGATGGTTAAACTATCTGAGACCCAATATCAAGAGGGGAAACATATCAGTTGAAGAAGAGGATTTGATTATTAGGCTTCACAAACTGCTGGGAAACAGGTGGTCATTGATAGCAAAGAGACTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATACTTGTTTGTGCAAAAAAGTTAATCATCACACAAAGGTGAAACCAGAAAGTTCAATGGCACAACCAACACATTCGACTCAGAATACTGAGGAAAAAGTAGCAGCAGAGAATAAAGAAGGCACTGATGATGGGAGTGGCGACTCAGAAGTTAACTTTGATGTCAACGAATTCTTCAACTTCTCCATTGAAGGACCCTATGCGTTCGATTGGGTGACCTAG 549 0.4171 MAPQNNETPKKTNNRGAWTAEEDQKLAQCIEIHGAKRWKTVAIKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEEDLIIRLHKLLGNRWSLIAKRLPGRTDNEIKNYWNTCLCKKVNHHTKVKPESSMAQPTHSTQNTEEKVAAENKEGTDDGSGDSEVNFDVNEFFNFSIEGPYAFDWVT* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00907 182 SMART sant 14 64 IPR001005 -
Phac2g00907 182 SMART sant 67 115 IPR001005 -
Phac2g00907 182 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac2g00907 182 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Phac2g00907 182 FunFam MYB-related transcription factor 14 67 - -
Phac2g00907 182 MobiDBLite consensus disorder prediction 141 155 - -
Phac2g00907 182 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac2g00907 182 FunFam Transcription factor TT2 71 143 - -
Phac2g00907 182 Gene3D - 7 68 - -
Phac2g00907 182 Gene3D - 71 148 - -
Phac2g00907 182 CDD SANT 72 111 IPR001005 -
Phac2g00907 182 MobiDBLite consensus disorder prediction 124 140 - -
Phac2g00907 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac2g00907 182 MobiDBLite consensus disorder prediction 123 159 - -
Phac2g00907 182 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 146 - -
Phac2g00907 182 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Phac2g00907 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Phac2g00907 182 CDD SANT 17 62 IPR001005 -
Phac2g00907 182 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00907 Phac-Chr2 5784130 5785174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00907 15 132 MYB Transcription Factor Family AT5G40330 61.157 9.11e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac2g00907 Myb_DNA-binding 4.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00907 K09422 - gmx:100816449 334.724