Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00906 ATGGTAGAGAAGAAGAAAAATGAAGCAGACGAAGCAAAGAAGAAGAAAAGAGAGAGTGAGAAGAAGCACTATCGTGGGGTACGCATGCGTCAATGGGGGAAATGGGTATCAGAAATAAGAGAACCCAAAAAAAAGTCCAGAATCTGGCTCGGCACATTTCCCACGGCAGAAATGGCGGCTCGAGCCCACGATGTGGCGGCGCTCACCATCAAAGGCACTTCCGCTTTCCTTAATTTCCCCGAACTAGCCTCACACCTTCCGCGCCCGCCCACCACTTCTCCTAAGGATATCCAAGCCGCCGCCGCCGAAGCTGCTGCACTCAATTGTGAGGCCCAGCCTCTGGTCCAGGCCCAAGCCCAAGCCCAGATTAGGGCCTCCTCGTTGAACGATGGGGATGACTTGTTCTTGGACCTCCCTGATCTTTTAGCTGACTCAAGTCAGAGTGCAGGTGGCTTTGGTTACTCTGCGTTGTGGCTCGTAGCCGCACCTGAACATCTAAACTCGGCTTTTCCGCTCGATGACCCTCCTTTTCCCTGGGGCTCTTCGCTTTAA 552 0.5344 MVEKKKNEADEAKKKKRESEKKHYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTAEMAARAHDVAALTIKGTSAFLNFPELASHLPRPPTTSPKDIQAAAAEAAALNCEAQPLVQAQAQAQIRASSLNDGDDLFLDLPDLLADSSQSAGGFGYSALWLVAAPEHLNSAFPLDDPPFPWGSSL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00906 183 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Phac2g00906 183 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Phac2g00906 183 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Phac2g00906 183 MobiDBLite consensus disorder prediction 1 17 - -
Phac2g00906 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 144 - -
Phac2g00906 183 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g00906 183 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Phac2g00906 183 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Phac2g00906 183 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Phac2g00906 183 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Phac2g00906 183 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Phac2g00906 183 Coils Coil 2 22 - -
Phac2g00906 183 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00906 Phac-Chr2 5770549 5771840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00906 13 177 AP2-EREBP Transcription Factor Family AT2G44940 44.976 1.14e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac2g00906 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00906 - - gmx:100817503 222.631