Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00891 ATGTACCATCCCTTTTATAAAGACCCTCGTCCACTTTCCCCTTCCAACTTCCAACATTCATTTCACAACCTAATCCTTCTCTCAACACAAACACAAACACTAAAAATCACGGTTTGCCTCAGACACAAAGAGAGATATCAGGGTTACAAAATGTACGAAGAAACTACCTACGACTCCGATTTGGCTCTTTTGGATTCCATTCGCCGCCACTTACTCGGGGACTTCGAGGATCTCAAATTCGGAGCCCCGATTGTTAACTCCGGTAACACTCCCCTTTACTCTCGGAGCACCAGTTTCAGTAGGTTGTACCCGTGTTTGAGTGACGATTGGGGGGAACTTCCTCTTAAGGAAGATGATTCAGAGGACATGGTGCTCTGCGGTGTTCTTCGCGATGCCATCAACGTAGGGTGGGTCCCATCTCTCAACGCAGCCTCACCGAACAGCTTCTCCTCGGGTTTCATCCCGGAAGTGACCGTGAAACCCGAACCGGATTTATTTCCGGCACCGGAACCTGTTTTCACCCCTTCGGTGGTTCAGAAGGATGCACCGGCGGTTGTTCCGGCGAAGGGGAAGCACTACCGCGGCGTGAGGCAGCGGCCGTGGGGAAAATTCGCGGCGGAGATCCGCGACCCGGCTAAAAACGGGGCTCGGGTCTGGCTCGGAACGTTCGAGACGGCTGAGGACGCCGCCCTGGCATACGATAGAGCCGCGTATCGAATGCGCGGCTCGCGGGCTTTGTTGAATTTCCCGCTTCGGATTAATTCGGGCGAGCCCGAACCGGTTCGGGTGACGTCGAAGCGAGCGTCACCGGAGCCTTCATCTTCGTCGGAGAGCGGATCGTCGGCGAAGCGGCGGAAGAAAGTGGTGGGGTCGACGGTGGCGGCTCCAAGTGGATTGAGAACGGGGCAAGTGGGAAGTCAAGTGTCTCAGTGCACACGTGCGGAACAGTTGTTGGTAACTAATGCGTTATGCTGA 975 0.5487 MYHPFYKDPRPLSPSNFQHSFHNLILLSTQTQTLKITVCLRHKERYQGYKMYEETTYDSDLALLDSIRRHLLGDFEDLKFGAPIVNSGNTPLYSRSTSFSRLYPCLSDDWGELPLKEDDSEDMVLCGVLRDAINVGWVPSLNAASPNSFSSGFIPEVTVKPEPDLFPAPEPVFTPSVVQKDAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTSKRASPEPSSSSESGSSAKRRKKVVGSTVAAPSGLRTGQVGSQVSQCTRAEQLLVTNALC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00891 324 SUPERFAMILY DNA-binding domain 192 252 IPR016177 GO:0003677
Phac2g00891 324 SMART rav1_2 192 256 IPR001471 GO:0003700|GO:0006355
Phac2g00891 324 CDD AP2 191 250 IPR001471 GO:0003700|GO:0006355
Phac2g00891 324 MobiDBLite consensus disorder prediction 257 306 - -
Phac2g00891 324 ProSiteProfiles AP2/ERF domain profile. 192 250 IPR001471 GO:0003700|GO:0006355
Phac2g00891 324 Gene3D AP2/ERF domain 191 253 IPR036955 GO:0003700|GO:0006355
Phac2g00891 324 FunFam Ethylene-responsive transcription factor 2 191 251 - -
Phac2g00891 324 PRINTS Ethylene responsive element binding protein signature 216 232 IPR001471 GO:0003700|GO:0006355
Phac2g00891 324 PRINTS Ethylene responsive element binding protein signature 193 204 IPR001471 GO:0003700|GO:0006355
Phac2g00891 324 PANTHER DNA-BINDING DOMAIN 182 283 IPR044808 GO:0003700|GO:0009873
Phac2g00891 324 Pfam AP2 domain 192 242 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00891 Phac-Chr2 5645067 5646594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00891 59 319 AP2-EREBP Transcription Factor Family AT4G17500 56.044 1.00e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00891 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00891 K09286 - gmx:100819649 395.201