Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00867 ATGGGTAAACAAGGTCCTTGCTATCACTGTGGAGTTACAAGCACACCACTCTGGCGCAATGGACCACCTGAGAAGCCAGTACTATGCAATGCATGCGGGTCTCGGTGGAGGACAAAGGGAACTCTTGCAAATTATACCCCTTTACATGCTCGAACAGAAACTGATGCTTGTGGAGATCAAAGGGTTTCCAGGGTAAAGAGCATATCAAATAAGAAGAGAGAAGTGACATTGCTCAAACAAAATAATAACCATGATAATGTACTGTCTGGAGGGTTTGCACCTGATTATAACCAGGGAGGTCAAATCTTCGTGGATGAAGATGTAAGCAACCGATCAAGTTCTGGATCAGCTATCTCTAACTCAGAGAGCTGTGCACAATTTGGTGTCATGGATGCTTGTGATCTGACAGGTCCTGCCCAGTCAGTGGTTTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGTTAGCCGTCCAAAGCCTTCTTCTGTTGAGAAGCTAACAAAAGATTTATGTACTATTCTTCATGAACAACAGTCTTATTTTTCTGCATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTATATCGTCCGTGAAGAAGAGTCTGAGGCTAGTTCTTTTTCAGTTGATAATAAACAATGCCCAACGAGTGAGGCATATTCTTATGTTGGTCCCATTCTAATGCATAATGATTCTAGTTACTTGAAACCATCATCTCTGGAAGTCGAAAAGATCAGGAACTATACTGGCTTAGGAAAGGAGCCGGAGCACCATAAAAGTGAAAAGTCTCAACTTGAAAGAGTACAAATCCTTGGCAATCATGAATCACCACTGTGCTCTATAGATTTAAATGATATAGTAAACTATGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAACAGTTACTGAAGTTACTTCCAGTGGTTGATACTGCTAAACTTCCCGATAGCCTTAAAGTCATGTTCAATAGTTCTCAATTCAAGGAGAACTTAACTTATTTTCAGCAGCTTCTTGCGGAAGGAGTTTTTGATATCTCTTTGTTGGGGGCAAAACCTGAAGACTGCAAGACTTTGAAAAGACTTGCAATATCCAATCTGTCAAAGTCAAAATGGGTAGAACACTATAATTTTCTTAAGAAATATGAAAACAAAGCTGGCAAATTTGATTCTTTTGGATCTGCTAGTACAGCATCAACTAATGTTGCAAACAAGAGAACACGTGACAGCAGAAATCAAAACTTTCCAGAATTGAATACAGTAATGAGGAGCCCCAAAAGAATGATCACAAAGGCTGGCTGTGAGGGAAAAGAGGGGGTAGAAGATGGTGCTTGCTATAGTCCAAAAAGCCTATTTGCTTTGCCTCCTGATGCTAGTTCACTCATGTTTGGTTCTTTAAACTTTGTTGAGGAGATTGGTGACCAGGATCTGCTGCTAGAGGTGCCATCTAACACTTCTTTTCCCCAGGCAGAGCTCTTGCACCCTAGTGTAAGCCTTGGTGCTCAAGCCAGCACTAGTAGTAGCTCAGTCTTCTCACATCTTATTCATCATTAA 1617 0.41 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTETDACGDQRVSRVKSISNKKREVTLLKQNNNHDNVLSGGFAPDYNQGGQIFVDEDVSNRSSSGSAISNSESCAQFGVMDACDLTGPAQSVVWDAMVPSKKRTCVSRPKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSILIRHPSYIVREEESEASSFSVDNKQCPTSEAYSYVGPILMHNDSSYLKPSSLEVEKIRNYTGLGKEPEHHKSEKSQLERVQILGNHESPLCSIDLNDIVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLKVMFNSSQFKENLTYFQQLLAEGVFDISLLGAKPEDCKTLKRLAISNLSKSKWVEHYNFLKKYENKAGKFDSFGSASTASTNVANKRTRDSRNQNFPELNTVMRSPKRMITKAGCEGKEGVEDGACYSPKSLFALPPDASSLMFGSLNFVEEIGDQDLLLEVPSNTSFPQAELLHPSVSLGAQASTSSSSVFSHLIHH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00867 538 PANTHER OSJNBB0038F03.10 PROTEIN 1 530 IPR044589 -
Phac2g00867 538 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 406 IPR044867 -
Phac2g00867 538 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Phac2g00867 538 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Phac2g00867 538 Gene3D - 285 391 IPR038108 -
Phac2g00867 538 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Phac2g00867 538 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Phac2g00867 538 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Phac2g00867 538 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
Phac2g00867 538 Pfam Asx homology domain 279 395 IPR028020 -
Phac2g00867 538 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00867 Phac-Chr2 5485473 5492175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00867 1 515 C2C2-Gata Transcription Factor Family AT4G17570 51.685 8.71e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac2g00867 ASXH 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00867 - - gmx:100798504 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00867 2 5485473 5492175 Phac3g03502 3 35367676 35373585 PCT