Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00812 ATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTTCCAAAGGGACTCAGGGTTCTTGTACTTGACGGAGATAGAAGTTCTGCTGCTGAGATAGGTGAACAGCTTCAGGCCATGGACTATAATGTTTCTATCTTCTATGACGAGAATGAAGCTTTGTCAGCAATATCGAGTAGTCCTGAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGTAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGACTTCGAAGAACCAGTGCCTGAATACCACAATGAAGTGCATTGCGCTCGGTGCCGTTGAGTTCCTCAGTAAACCACTATCTGAGGACAAGCTCCAAAATATTTGGCAGCATGTTGTTCACAAGGCATTTAATGCTGGGGCAAATGGTCTGTCTGAATCACTAAAACCTGTCAAAGAATCTGTAGAATCTTTAGAATCGGTGCTGCAGCTCCAAACAGGCAATGAACAAGATAAAACTCATAAAAAGACGATGTCAATTGATTTAGAGAATGTGTCCAGGTTTGGTGATGATGACAAAGAGCAATCTATATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGTTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAACAGAAAAAGAAAGTGGGGAACATGATGGGGAGTGCAAATCAGTCGAAGCTTCATGTGAGAATTTGAATGCTGAAAGTTCTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACCGAATCTACACAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTTCAAAAAAGACCGGAGTACTTCATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCGGAGCTGCATAAAAAATTTGTAAAGGCTGTCGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGCTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCTGGGGAAGAAGATAGAAAATGGCATAATCAAAGAGATGCAATGCAAAGGAGCTTTTATCTGCAGAGACCAATCATGGCCTACCCTTCCTATCATTCTAATCAAACCCTTTCTCCAGCTCCTATATATCCTATGTGGGGACAACCTGGAAGTCAAATGGCTGGCGTACAGATGTGGGGCTCTCCTGCATACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCACGTGGATGCTTGGGGATGCCCACTGTTCCCACCTCCTCAAGCTCCTGGTTTTCCCTACAATCAACAGAATATACCTGGATTGCACACACCTAAAGCAGTGGATTATAGATTCGGCATGCCACGTAGTTCCTTTGAGCATCATCCGGCACAGGAGGTGGTAGACAAGGTGGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTGGGACTCAAAGCTCCTTCCACGGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATATCCAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA 1695 0.4425 MVCTANDLQGWKDFPKGLRVLVLDGDRSSAAEIGEQLQAMDYNVSIFYDENEALSAISSSPEGFHVAIVEVSTSSSLGGFKFLENAKDLPTIMTSKNQCLNTTMKCIALGAVEFLSKPLSEDKLQNIWQHVVHKAFNAGANGLSESLKPVKESVESLESVLQLQTGNEQDKTHKKTMSIDLENVSRFGDDDKEQSICDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSTEKESGEHDGECKSVEASCENLNAESSPQPTEPEETLIKEEEDFANGSKGERAVSPNLHNEKFLSNADGHTSSKKTGVLHDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHKRQSAPGEEDRKWHNQRDAMQRSFYLQRPIMAYPSYHSNQTLSPAPIYPMWGQPGSQMAGVQMWGSPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFPYNQQNIPGLHTPKAVDYRFGMPRSSFEHHPAQEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00812 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 315 374 IPR017930 -
Phac2g00812 564 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Phac2g00812 564 NCBIfam myb-like DNA-binding domain, SHAQKYF class 318 373 IPR006447 GO:0003677
Phac2g00812 564 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 552 IPR044825 GO:0003700|GO:0045893
Phac2g00812 564 SUPERFAMILY Homeodomain-like 317 374 IPR009057 -
Phac2g00812 564 Gene3D - 314 375 - -
Phac2g00812 564 Pfam Myb-like DNA-binding domain 321 370 IPR001005 -
Phac2g00812 564 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Phac2g00812 564 SMART REC_2 18 128 IPR001789 GO:0000160
Phac2g00812 564 FunFam Two-component response regulator 314 376 - -
Phac2g00812 564 SUPERFAMILY CheY-like 16 134 IPR011006 -
Phac2g00812 564 FunFam Two-component response regulator-like APRR2 17 142 - -
Phac2g00812 564 Gene3D - 18 174 - -
Phac2g00812 564 MobiDBLite consensus disorder prediction 192 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00812 Phac-Chr2 4988409 4995013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00812 1 552 Response Regulator Gene Family AT4G18020 47.170 7.46e-137 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac2g00812 Response_reg 4.4e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00812 - - vun:114173738 1046.96