Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00811 ATGCTTGATGTTAGCACATGTGGTATTTCTCTAGATGGTTTATTAAGGTTCAAAGCTTTTCATTTGCGCTTTAGACTATATGCCCCCAAGTGTTCTGAAGCTGGAAGTGGTCCAAATTCTAAAGTTTCTATCTTCTATGACGAGAATGAAGCTTTGTCAGCAATATCGAGTAGTCCTGAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGTAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGACTTCGAAGAACCAGTGCCTGAATACCACAATGAAGTGCATTGCGCTCGGTGCCGTTGAGTTCCTCAGTAAACCACTATCTGAGGACAAGCTCCAAAATATTTGGCAGCATGTTGTTCACAAGGCATTTAATGCTGGGGCAAATGGTCTGTCTGAATCACTAAAACCTGTCAAAGAATCTGTAGAATCTTTAGAATCGGTGCTGCAGCTCCAAACAGGCAATGAACAAGATAAAACTCATAAAAAGACGATGTCAATTGATTTAGAGAATGTGTCCAGGTTTGGTGATGATGACAAAGAGCAATCTATATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGTTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAACAGAAAAAGAAAGTGGGGAACATGATGGGGAGTGCAAATCAGTCGAAGCTTCATGTGAGAATTTGAATGCTGAAAGTTCTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACCGAATCTACACAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTTCAAAAAAGACCGGAGTACTTCATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCGGAGCTGCATAAAAAATTTGTAAAGGCTGTCGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGCTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCTGGGGAAGAAGATAGAAAATGGCATAATCAAAGAGATGCAATGCAAAGGAGCTTTTATCTGCAGAGACCAATCATGGCCTACCCTTCCTATCATTCTAATCAAACCCTTTCTCCAGCTCCTATATATCCTATGTGGGGACAACCTGGAAGTCAAATGGCTGGCGTACAGATGTGGGGCTCTCCTGCATACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCACGTGGATGCTTGGGGATGCCCACTGTTCCCACCTCCTCAAGCTCCTGGTTTTCCCTACAATCAACAGAATATACCTGGATTGCACACACCTAAAGCAGTGGATTATAGATTCGGCATGCCACGTAGTTCCTTTGAGCATCATCCGGCACAGGAGGTGGTAGACAAGGTGGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTGGGACTCAAAGCTCCTTCCACGGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATATCCAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA 1689 0.4387 MLDVSTCGISLDGLLRFKAFHLRFRLYAPKCSEAGSGPNSKVSIFYDENEALSAISSSPEGFHVAIVEVSTSSSLGGFKFLENAKDLPTIMTSKNQCLNTTMKCIALGAVEFLSKPLSEDKLQNIWQHVVHKAFNAGANGLSESLKPVKESVESLESVLQLQTGNEQDKTHKKTMSIDLENVSRFGDDDKEQSICDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSTEKESGEHDGECKSVEASCENLNAESSPQPTEPEETLIKEEEDFANGSKGERAVSPNLHNEKFLSNADGHTSSKKTGVLHDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHKRQSAPGEEDRKWHNQRDAMQRSFYLQRPIMAYPSYHSNQTLSPAPIYPMWGQPGSQMAGVQMWGSPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFPYNQQNIPGLHTPKAVDYRFGMPRSSFEHHPAQEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00811 562 Gene3D - 312 373 - -
Phac2g00811 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 313 372 IPR017930 -
Phac2g00811 562 Pfam Myb-like DNA-binding domain 319 368 IPR001005 -
Phac2g00811 562 SUPERFAMILY Homeodomain-like 315 372 IPR009057 -
Phac2g00811 562 PANTHER TRANSCRIPTION ACTIVATOR GLK1 41 550 IPR044825 GO:0003700|GO:0045893
Phac2g00811 562 FunFam Two-component response regulator 312 374 - -
Phac2g00811 562 SUPERFAMILY CheY-like 41 132 IPR011006 -
Phac2g00811 562 ProSiteProfiles Response regulatory domain profile. 1 130 IPR001789 GO:0000160
Phac2g00811 562 Gene3D - 28 172 - -
Phac2g00811 562 NCBIfam myb-like DNA-binding domain, SHAQKYF class 316 371 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00811 Phac-Chr2 4988409 4995013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00811 9 550 Response Regulator Gene Family AT4G18020 43.890 4.29e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac2g00811 Myb_DNA-binding 2.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00811 - - vum:124823451 972.615