LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g00811	ATGCTTGATGTTAGCACATGTGGTATTTCTCTAGATGGTTTATTAAGGTTCAAAGCTTTTCATTTGCGCTTTAGACTATATGCCCCCAAGTGTTCTGAAGCTGGAAGTGGTCCAAATTCTAAAGTTTCTATCTTCTATGACGAGAATGAAGCTTTGTCAGCAATATCGAGTAGTCCTGAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGTAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGACTTCGAAGAACCAGTGCCTGAATACCACAATGAAGTGCATTGCGCTCGGTGCCGTTGAGTTCCTCAGTAAACCACTATCTGAGGACAAGCTCCAAAATATTTGGCAGCATGTTGTTCACAAGGCATTTAATGCTGGGGCAAATGGTCTGTCTGAATCACTAAAACCTGTCAAAGAATCTGTAGAATCTTTAGAATCGGTGCTGCAGCTCCAAACAGGCAATGAACAAGATAAAACTCATAAAAAGACGATGTCAATTGATTTAGAGAATGTGTCCAGGTTTGGTGATGATGACAAAGAGCAATCTATATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGTTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAACAGAAAAAGAAAGTGGGGAACATGATGGGGAGTGCAAATCAGTCGAAGCTTCATGTGAGAATTTGAATGCTGAAAGTTCTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACCGAATCTACACAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTTCAAAAAAGACCGGAGTACTTCATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCGGAGCTGCATAAAAAATTTGTAAAGGCTGTCGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGCTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCTGGGGAAGAAGATAGAAAATGGCATAATCAAAGAGATGCAATGCAAAGGAGCTTTTATCTGCAGAGACCAATCATGGCCTACCCTTCCTATCATTCTAATCAAACCCTTTCTCCAGCTCCTATATATCCTATGTGGGGACAACCTGGAAGTCAAATGGCTGGCGTACAGATGTGGGGCTCTCCTGCATACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCACGTGGATGCTTGGGGATGCCCACTGTTCCCACCTCCTCAAGCTCCTGGTTTTCCCTACAATCAACAGAATATACCTGGATTGCACACACCTAAAGCAGTGGATTATAGATTCGGCATGCCACGTAGTTCCTTTGAGCATCATCCGGCACAGGAGGTGGTAGACAAGGTGGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTGGGACTCAAAGCTCCTTCCACGGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATATCCAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA	1689	0.4387	MLDVSTCGISLDGLLRFKAFHLRFRLYAPKCSEAGSGPNSKVSIFYDENEALSAISSSPEGFHVAIVEVSTSSSLGGFKFLENAKDLPTIMTSKNQCLNTTMKCIALGAVEFLSKPLSEDKLQNIWQHVVHKAFNAGANGLSESLKPVKESVESLESVLQLQTGNEQDKTHKKTMSIDLENVSRFGDDDKEQSICDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSTEKESGEHDGECKSVEASCENLNAESSPQPTEPEETLIKEEEDFANGSKGERAVSPNLHNEKFLSNADGHTSSKKTGVLHDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHKRQSAPGEEDRKWHNQRDAMQRSFYLQRPIMAYPSYHSNQTLSPAPIYPMWGQPGSQMAGVQMWGSPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFPYNQQNIPGLHTPKAVDYRFGMPRSSFEHHPAQEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC*	563

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Phac2g00811	562	Gene3D	-	312	373	-	-
Phac2g00811	562	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	313	372	IPR017930	-
Phac2g00811	562	Pfam	Myb-like DNA-binding domain	319	368	IPR001005	-
Phac2g00811	562	SUPERFAMILY	Homeodomain-like	315	372	IPR009057	-
Phac2g00811	562	PANTHER	TRANSCRIPTION ACTIVATOR GLK1	41	550	IPR044825	GO:0003700\|GO:0045893
Phac2g00811	562	FunFam	Two-component response regulator	312	374	-	-
Phac2g00811	562	SUPERFAMILY	CheY-like	41	132	IPR011006	-
Phac2g00811	562	ProSiteProfiles	Response regulatory domain profile.	1	130	IPR001789	GO:0000160
Phac2g00811	562	Gene3D	-	28	172	-	-
Phac2g00811	562	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	316	371	IPR006447	GO:0003677

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g00811	Phac-Chr2	4988409	4995013	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g00811	9	550	Response Regulator Gene Family	AT4G18020	43.890	4.29e-117	355

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-ARR-B	Phac2g00811		Myb_DNA-binding	2.9e-08	CL0123

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g00811	-		-	vum:124823451	972.615

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