Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00785 ATGAATTACAGGGATAATGTTCTCTCCGATACCCCTCTATGGGTTTTGTGCAACGAGGTTCAATTGAAAGACATTTCGTTGAAATGCATGGAAATTATATACAAAGATACTGTGTCAAAGCTTGTTGCTTTGGGGCACAATGAGGATATTGCCGTGAAAGCGATTCTGCAAAATGTTCATTGTTATGGCGCCAACGATTTGGCAACAGACCTGCTGCACAATACCTTGGCTTGTTTGACAAAGGGGAGCTTGGACATGTATGAGTCCAAGCCCGCGTTCTCTGATTTGAAGAAGCTTGAGGAGTACACTTTGATGAATCTTGTGTTTTTGTTGCAAGAAGTGAGGCTCGAGTTAGGTGAGGGTGATGCTATGTGGTGTCTCCTCATGAGCGATTACAATGTGTTAAAGGCAATTACCGTCCATATTCCTGTTGTAAGCATGTGTCCTCCTCCTTTACCCGAGCTTGAGAGCGAGGAAGGGGGATTTAGAAAAGAGGGAGGCTCAGATATTCCTTTAAAAGGGTTCTTTTGTGGTAAGGAGATGACTGTACGGTTACAGAGAGATATTGAATTCCCGAAAAGATTTGATCTTACTCCTGCGATGATTTGTTCGTTGAAAAGCAATGTTGCAGTGTTTGCTGATGGTTATAAGGCCAACTCAAAACAGGTCCAGTCCAATGCAGGAAAACTTCCTGTGATTAGCACTGTTTCGAAATTGGACTCTTCGTCTGTTTCTGTGACTGCAGTCCTTGGTGATCTGTCTGGTGACTCTCAGAATATGAATGACCAGGATGACTTTAACTCTGTGTTGAGTAAATTTCATGATCTAAATATTGATGAGAACTTGGAGTTTGTGGCAGAAGATGAGAAAAATTCGGTGATAGTCACTCTATTGCATCAGATAAAGGATCTTGAGAAACAGGTAAAGGAGCGGAAAGATTGGGCTCATGAGAAGGCAATCCAAGCTGCAAGAAAGCTTAACAGCTATCTAATTGAGCTGAAAACATTCAGGATAGAAAAAGAGGAGAATCAAAGACTGAAGAAGGGGAAAGAGGAAAATGAGGAGCTTGAGGACCCTACCATGGTGAGACTCTTAGAAATGGAGGAGGCTTTGAGAAAGGCTTGTGGTCAAATGGATCTAGCAGCTGCAGGAGTCGGAAAACTTGAGGCGCAGAAAGCTGAAATCAAAGCAGAGTTAGAAGCTTGTAAATTAAGTGCATCAGAGTCAGTCGCAAGCTGCTTGCAAATTGCAAAAAGGGAGAAAAAGTGCTTAAAGAAACTTCTGGCTTGGGAAAAACAGGAAGCGAAGATAAAACAGGATATTTCAGATGAAAAACAGAAGATTTTGGAGATACAAGAAGAGTTGGCTCAGATTAAAAAACGTGCAAAAGAAGCTGAGGTCATGAAGGGTGAAGAGTTAAAGGCTAAGGAGGAAGCCTTAGCACTGATTGAAGAGGAACGCCGTTCTGTGGAAGCAGCTGAGGCTAATAGAAAAAGAAATCTTAAGGCTTTAAGCCTGAAGATGGAGATAGATTTCCAGCGTCGCAAGGATGATCTCCTAAGACTGGAGCAGGAGATTTCGTGTCTTAAAGCATCTGCACAGTCGGCTATTTTGCCTACAAGTGAGTCTGAGGGTGCAGAGCCCCACAGAGAGATAATTGTTAAGCTTCTGCAAGAATTAGATAGTGTACCAGATTTTTCTGGAAAAGAAGCCACCGGTAATACTGATAGAGAATGCATTATATGTGGAAAAGATGAGGTTTCCGTAATTTTCTTGCCATGTGCACACCAAGTTATGTGTGCCAGTTGCAGTAAAGAGTATGGGAGAAATGGCAAAGCTATTTGTCCATGCTGTTGGGTTCCAATCGAACAGAGAATTCGTATATATGGGGCAAGTTCGTAG 1902 0.4232 MNYRDNVLSDTPLWVLCNEVQLKDISLKCMEIIYKDTVSKLVALGHNEDIAVKAILQNVHCYGANDLATDLLHNTLACLTKGSLDMYESKPAFSDLKKLEEYTLMNLVFLLQEVRLELGEGDAMWCLLMSDYNVLKAITVHIPVVSMCPPPLPELESEEGGFRKEGGSDIPLKGFFCGKEMTVRLQRDIEFPKRFDLTPAMICSLKSNVAVFADGYKANSKQVQSNAGKLPVISTVSKLDSSSVSVTAVLGDLSGDSQNMNDQDDFNSVLSKFHDLNIDENLEFVAEDEKNSVIVTLLHQIKDLEKQVKERKDWAHEKAIQAARKLNSYLIELKTFRIEKEENQRLKKGKEENEELEDPTMVRLLEMEEALRKACGQMDLAAAGVGKLEAQKAEIKAELEACKLSASESVASCLQIAKREKKCLKKLLAWEKQEAKIKQDISDEKQKILEIQEELAQIKKRAKEAEVMKGEELKAKEEALALIEEERRSVEAAEANRKRNLKALSLKMEIDFQRRKDDLLRLEQEISCLKASAQSAILPTSESEGAEPHREIIVKLLQELDSVPDFSGKEATGNTDRECIICGKDEVSVIFLPCAHQVMCASCSKEYGRNGKAICPCCWVPIEQRIRIYGASS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00785 633 Coils Coil 434 468 - -
Phac2g00785 633 PANTHER OS05G0141500 PROTEIN 14 628 IPR046934 -
Phac2g00785 633 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 567 630 IPR013083 -
Phac2g00785 633 Coils Coil 385 405 - -
Phac2g00785 633 ProSiteProfiles Zinc finger RING-type profile. 579 618 IPR001841 -
Phac2g00785 633 Coils Coil 473 503 - -
Phac2g00785 633 CDD RING-HC_MIP1-like 574 628 - -
Phac2g00785 633 SUPERFAMILY RING/U-box 559 625 - -
Phac2g00785 633 Pfam Family of unknown function (DUF6592) 30 139 IPR046527 -
Phac2g00785 633 Pfam Zinc finger, C3HC4 type (RING finger) 576 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00785 Phac-Chr2 4841126 4844689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00785 517 628 C3H Transcription Factor Family AT3G06140 28.873 3.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00785 - - vra:106777712 1037.71