Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g00780 | ATGCCCGTTCCGCTTGCCCCCTACCCTCCACCACCTCCATATACGCCTCCACCAAATGGTGCGCAGAGTCAAGTTGTCTGTTCTGGGTGTAGAAACCTTCTGCTTTATCCAGTTGGAGCCACCTCAGTGTGCTGTGCTGTTTGCAATGCAGTCACAACTGTGCCACCTCCTGAAATGGCCCAGTTAGTATGTGGAGGCTGCCACACTCTCCTCATGTTCATCCGTGGAGCCACAAATGTCCAATGCTCTTGTTGTCACACAGTCAATCTAGCTTTGGAAGGTATTGAACCACAAATGATCAGATGA | 306 | 0.5065 | MPVPLAPYPPPPPYTPPPNGAQSQVVCSGCRNLLLYPVGATSVCCAVCNAVTTVPPPEMAQLVCGGCHTLLMFIRGATNVQCSCCHTVNLALEGIEPQMIR* | 102 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g00780 | 101 | NCBIfam | zinc finger domain, LSD1 subclass | 24 | 54 | IPR005735 | - | |
Phac2g00780 | 101 | NCBIfam | zinc finger domain, LSD1 subclass | 61 | 90 | IPR005735 | - | |
Phac2g00780 | 101 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Phac2g00780 | 101 | Pfam | LSD1 zinc finger | 64 | 88 | IPR005735 | - | |
Phac2g00780 | 101 | Pfam | LSD1 zinc finger | 27 | 51 | IPR005735 | - | |
Phac2g00780 | 101 | PANTHER | PROTEIN LSD1 | 15 | 54 | IPR040319 | - | |
Phac2g00780 | 101 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g00780 | Phac-Chr2 | 4834379 | 4837008 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Phac2g00780 | zf-LSD1 | 4.9e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g00780 | - | - | vun:114174628 | 162.54 |