Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00776 ATGGATTCTCGGGAACCGCACCAGCAACCGCAATTGCCAAACATGATGGTGGGACCCACCTCCTACCCTTCCATGTTGGCCCCTGCCACCGCCCGATTCCCTTTCATCAACAGCAACCACCACCACCACAACCCTCCTCCTCCACCACCACCTCCTCCCGAGCCTCTCAACGACAACAACAACACGTGCGAGGCTGCGCTGAAGCCGTGCGCGCTTGGAGTGGGTTCCTCGGAGTCCTCGAAGAAGAAGAGGGGCCGGCCCAGAAAGTACTCGCCAGATGGCAACATTGCGTTGGGCCTTGTCCCCAACCACGCCGCCGCTTCTTCTGCCGAACCTCCAGCCAAGAAGCACCGCGGACGCCCCCCTGGTTCCGGCAAGAAACAGATGGACGCCCTTGGAATCTCTGGAACTGGTTTCACTCCCCATGTTATATCAGCCGAAGCTGGCGAGGACATTGCTGCAAAAATTATGGCCTTCTGTGAGCAAGGACCACGAACAGTTTGCATTCTTTCTGCTATTGGTCCTATCCGCAATGTCACCATTCGACAGCCGCCCTCTGCCTCCACCCTGTCTGGCCCTGATGTGTCATATGAGGGTGAATTTGAGATCATATCACTTTCAGGTTTTACTCAACAATCTGAAAATAATAGTGGTCATAACGGAATACGTTCCTTGAATGTGAGTTTGGCAGGTCCTGATGGACGAGTATTGGGTGGTGAAGTTGCTGGGGCTCTTACTGCAGCGTCGGCAGTGCAGGTAGTTGTGGGTAGCTTTATTGCAGATGGAAAAAAGTCTAGCTCAAGTAACCTGAAATCTGGACGTTCTACGACGCCATCATCTCAATTGTTAACTTTTGGTGCTCCTACGACTCCAACCACTCCTACTTCTCAAGGGCCTTCAACAGAGTCATCTGAGGATAACGAGAATAGTAATTTTATTAAAGGCCCGGGAGTCCCGGGACTCTTTAATAATGCCAGTCAGCCTATTCATAACCTGCCGATGTACCATCATCAACTGTGGACTGGCCATACTCAGCAGTGA 1041 0.5235 MDSREPHQQPQLPNMMVGPTSYPSMLAPATARFPFINSNHHHHNPPPPPPPPPEPLNDNNNTCEAALKPCALGVGSSESSKKKRGRPRKYSPDGNIALGLVPNHAAASSAEPPAKKHRGRPPGSGKKQMDALGISGTGFTPHVISAEAGEDIAAKIMAFCEQGPRTVCILSAIGPIRNVTIRQPPSASTLSGPDVSYEGEFEIISLSGFTQQSENNSGHNGIRSLNVSLAGPDGRVLGGEVAGALTAASAVQVVVGSFIADGKKSSSSNLKSGRSTTPSSQLLTFGAPTTPTTPTSQGPSTESSEDNENSNFIKGPGVPGLFNNASQPIHNLPMYHHQLWTGHTQQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00776 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 40 307 IPR039605 GO:0003680
Phac2g00776 346 CDD DUF296 140 258 IPR005175 -
Phac2g00776 346 MobiDBLite consensus disorder prediction 41 57 - -
Phac2g00776 346 Gene3D - 141 271 - -
Phac2g00776 346 ProSiteProfiles PPC domain profile profile. 136 280 IPR005175 -
Phac2g00776 346 MobiDBLite consensus disorder prediction 1 128 - -
Phac2g00776 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 258 IPR005175 -
Phac2g00776 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 259 - -
Phac2g00776 346 MobiDBLite consensus disorder prediction 263 311 - -
Phac2g00776 346 MobiDBLite consensus disorder prediction 1 18 - -
Phac2g00776 346 SMART AT_hook_2 81 93 IPR017956 GO:0003677
Phac2g00776 346 SMART AT_hook_2 115 127 IPR017956 GO:0003677
Phac2g00776 346 MobiDBLite consensus disorder prediction 263 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00776 Phac-Chr2 4807702 4811794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00776 78 346 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 43.312 6.13e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00776 - - pvu:PHAVU_002G006700g 610.142