Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00774 ATGTCTATGGCTGGTTTGGATTTAGGCACGGCTTCGCGCTTCGTTCAAAGTCTCCAAAGACCAGACTTCAACCACCATCACCACCACCAGCAAGAATCCGAGGAAGACGCCAAACAGTCAGACCCTTTCTCGACTGAAGATGGGGCGCAACAAGCCAGCCCCGGCGACGTGGGCGGGCGGCGGCCAAGAGGGCGGCCGCAGGGGTCCAAAAACAAGCCGAAGCCGCCTGTGATCATCACCAGGGAGAGCGCCAACACGCTCCGCGCGCACATCCTCGAGGTGGGCAGCGGCTGCGACGTGTTCGACAGCGTTGCCAGCTACGCGCGGCGGAGGCAGCGCGGGATCTGTATCTTGAGCGGCAGCGGCACCGTGACAAATGTGAGCCTGCGGCAGCCGGCGGCGTCGGGGGCGGTGGTGACTCTTCACGGGAGGTTCGAGATACTGTCCCTGACGGGATCGTTCCTTCCTCCGCCGGCGCCACCGGGCGCGACAAGTCTGAGCGTTTACCTGGCCGGAGGCCAGGGGCAGGTGGTGGGTGGGAGTGTGGTGGGAGAGTTGACCGCGGCGGGACCGGTGATTGTGATGGCAGCGTCGTTCACCAACGTGGCTTATGAACGGTTACCGTTAGAAGAAGAAGAAGAGGAACAGGTTCAGATATCTGGTGGTGCTGGCGTGGGAAATAATAGTAATAATAATATTATTAATAATAACCCTTTTCCTGATCCTTCTTCGGGACTCCCTTTCTTCAGTTTGCCCATGAATGTTCAGTTCCCGGTGGATGGTTGGGCGGGAAACTCAGCTTCTCGTTCACCATTTTGA 819 0.5873 MSMAGLDLGTASRFVQSLQRPDFNHHHHHQQESEEDAKQSDPFSTEDGAQQASPGDVGGRRPRGRPQGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSVASYARRRQRGICILSGSGTVTNVSLRQPAASGAVVTLHGRFEILSLTGSFLPPPAPPGATSLSVYLAGGQGQVVGGSVVGELTAAGPVIVMAASFTNVAYERLPLEEEEEEQVQISGGAGVGNNSNNNIINNNPFPDPSSGLPFFSLPMNVQFPVDGWAGNSASRSPF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00774 272 MobiDBLite consensus disorder prediction 20 42 - -
Phac2g00774 272 MobiDBLite consensus disorder prediction 218 237 - -
Phac2g00774 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 218 - -
Phac2g00774 272 MobiDBLite consensus disorder prediction 221 237 - -
Phac2g00774 272 FunFam AT-hook motif nuclear-localized protein 87 215 - -
Phac2g00774 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Phac2g00774 272 MobiDBLite consensus disorder prediction 17 78 - -
Phac2g00774 272 CDD DUF296 88 171 IPR005175 -
Phac2g00774 272 Gene3D - 87 222 - -
Phac2g00774 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 228 IPR014476 GO:0003680
Phac2g00774 272 ProSiteProfiles PPC domain profile profile. 84 220 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00774 Phac-Chr2 4784659 4786503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00774 3 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 62.583 6.07e-94 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00774 - - gmx:100818680 375.941