Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00770 ATGGCTGCAGAGATTGGCCTAGTCTCCATGACCCAGATCCAAAAATTATCACAATCCCAACACCTCAAAAACCAACAAACTCAACCAAACCCTAACACCACCACCACCACCCCTTCCTCTTGGATGTGGAATCCTAGGGAACAACTGCAGCAGCAAGAAGATGATGATGACTCGTGGGAGGTCAGAGCTTTTGCAGAAGACACAAGGAACATCATGGGAACCACATGGCCTCCACGGTCCTACACCTGCACCTACTGCAGAAGGGAGTTCCGCTCCGCCCAAGCTCTCGGCGGCCACATGAACGTCCACCGCCGCGACCGTGCACGCCTCCATCAACCCCCTCCTTCCTCCTCCACCACCACCACCACCTCTTCTCTTCCCACTTCTTCACCCTACATCAACATCCCTCCTCAAGACCTTGTTGCAAATGCTGGGTTATGCCTCCTCTACCACTTGCCATCAAGCCCTAGTGCACCACCCTTCCCTAATTCCCCCACTTCTAATGGCCCTTCTTCTTCCCCCTCTCCATCCACTTTTCTCTCTATCTCCTCCTATCCTTCAAACAATTTCCTGATGCAAACTTCCTTTAATTTTCCCAGTGCACCATCAACTGGGATCAACCCTGCTACTGTTTCCTCTTTCTGCTATAATAACTCTAGCAAAGTGGAACAATCGGCAACTTCTTCCTCTTTCGCTACCGGCCACCTGGAAGAGCTTGATCTAGAGCTCCGCCTCGGGCACAAACCAACACAAACCTCATAA 762 0.5144 MAAEIGLVSMTQIQKLSQSQHLKNQQTQPNPNTTTTTPSSWMWNPREQLQQQEDDDDSWEVRAFAEDTRNIMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQPPPSSSTTTTTSSLPTSSPYINIPPQDLVANAGLCLLYHLPSSPSAPPFPNSPTSNGPSSSPSPSTFLSISSYPSNNFLMQTSFNFPSAPSTGINPATVSSFCYNNSSKVEQSATSSSFATGHLEELDLELRLGHKPTQTS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00770 253 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Phac2g00770 253 Pfam C2H2-type zinc finger 81 105 - -
Phac2g00770 253 Gene3D Classic Zinc Finger 72 128 - -
Phac2g00770 253 PANTHER OS07G0101800 PROTEIN 53 249 - -
Phac2g00770 253 SMART c2h2final6 81 103 IPR013087 -
Phac2g00770 253 MobiDBLite consensus disorder prediction 158 179 - -
Phac2g00770 253 MobiDBLite consensus disorder prediction 18 43 - -
Phac2g00770 253 MobiDBLite consensus disorder prediction 106 132 - -
Phac2g00770 253 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Phac2g00770 253 MobiDBLite consensus disorder prediction 112 132 - -
Phac2g00770 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00770 Phac-Chr2 4748286 4749808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00770 39 249 C2H2 Transcription Factor Family AT4G17810 39.819 3.16e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g00770 zf-C2H2_6 2.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00770 - - gmx:100818142 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00770 2 4748286 4749808 Phac2g00770 2 4748286 4749808 ECH