Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g00770 | ATGGCTGCAGAGATTGGCCTAGTCTCCATGACCCAGATCCAAAAATTATCACAATCCCAACACCTCAAAAACCAACAAACTCAACCAAACCCTAACACCACCACCACCACCCCTTCCTCTTGGATGTGGAATCCTAGGGAACAACTGCAGCAGCAAGAAGATGATGATGACTCGTGGGAGGTCAGAGCTTTTGCAGAAGACACAAGGAACATCATGGGAACCACATGGCCTCCACGGTCCTACACCTGCACCTACTGCAGAAGGGAGTTCCGCTCCGCCCAAGCTCTCGGCGGCCACATGAACGTCCACCGCCGCGACCGTGCACGCCTCCATCAACCCCCTCCTTCCTCCTCCACCACCACCACCACCTCTTCTCTTCCCACTTCTTCACCCTACATCAACATCCCTCCTCAAGACCTTGTTGCAAATGCTGGGTTATGCCTCCTCTACCACTTGCCATCAAGCCCTAGTGCACCACCCTTCCCTAATTCCCCCACTTCTAATGGCCCTTCTTCTTCCCCCTCTCCATCCACTTTTCTCTCTATCTCCTCCTATCCTTCAAACAATTTCCTGATGCAAACTTCCTTTAATTTTCCCAGTGCACCATCAACTGGGATCAACCCTGCTACTGTTTCCTCTTTCTGCTATAATAACTCTAGCAAAGTGGAACAATCGGCAACTTCTTCCTCTTTCGCTACCGGCCACCTGGAAGAGCTTGATCTAGAGCTCCGCCTCGGGCACAAACCAACACAAACCTCATAA | 762 | 0.5144 | MAAEIGLVSMTQIQKLSQSQHLKNQQTQPNPNTTTTTPSSWMWNPREQLQQQEDDDDSWEVRAFAEDTRNIMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQPPPSSSTTTTTSSLPTSSPYINIPPQDLVANAGLCLLYHLPSSPSAPPFPNSPTSNGPSSSPSPSTFLSISSYPSNNFLMQTSFNFPSAPSTGINPATVSSFCYNNSSKVEQSATSSSFATGHLEELDLELRLGHKPTQTS* | 254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g00770 | 253 | SUPERFAMILY | beta-beta-alpha zinc fingers | 78 | 108 | IPR036236 | - | |
Phac2g00770 | 253 | Pfam | C2H2-type zinc finger | 81 | 105 | - | - | |
Phac2g00770 | 253 | Gene3D | Classic Zinc Finger | 72 | 128 | - | - | |
Phac2g00770 | 253 | PANTHER | OS07G0101800 PROTEIN | 53 | 249 | - | - | |
Phac2g00770 | 253 | SMART | c2h2final6 | 81 | 103 | IPR013087 | - | |
Phac2g00770 | 253 | MobiDBLite | consensus disorder prediction | 158 | 179 | - | - | |
Phac2g00770 | 253 | MobiDBLite | consensus disorder prediction | 18 | 43 | - | - | |
Phac2g00770 | 253 | MobiDBLite | consensus disorder prediction | 106 | 132 | - | - | |
Phac2g00770 | 253 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 83 | 103 | IPR013087 | - | |
Phac2g00770 | 253 | MobiDBLite | consensus disorder prediction | 112 | 132 | - | - | |
Phac2g00770 | 253 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 81 | 108 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g00770 | Phac-Chr2 | 4748286 | 4749808 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g00770 | 39 | 249 | C2H2 Transcription Factor Family | AT4G17810 | 39.819 | 3.16e-40 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac2g00770 | zf-C2H2_6 | 2.9e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g00770 | - | - | gmx:100818142 | 336.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac2g00770 | 2 | 4748286 | 4749808 | Phac2g00770 | 2 | 4748286 | 4749808 | ECH |