Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00762 ATGATGGAAATCGCGTCCACCAACTACTTCCCTGAACTTGAAATGGAGTATCTTAGCTTTCTTGATCAATATCAGATGGATTCTATTGCATGCCCACTGGATGACTTCGACTTCGAGTCTTTCTCCGGATCCCCGGAGAGCAATTCATCTTATCAGCTCAACTCCGAAAGCACACCAAATTGTTTCCCAGCTGAAAGTCCTGATCTGTCTTTTACCCCTCCAAGACCAACCAAGAGGCTCAAGACATTCAATACCTTCAAAACGTGTGCCAGTCACTTAATTTCCCAGAATGTTTCCGCTTCTCCATCCTCCCAACTTATTTCTTTTGGCCACGTTAATGCTTCACCACGTGCTTCCCACCAATTTCACAACCTCCATGGGAAGCCTAAAATCGAAAACCCGTCTAGTGAGAACATGGACTTTACAGACTTCGTTTCTCAAGGTTCATATGAGGGCAAAAGTTTCCTCAGTTCTGATAATAGAACGAACCAGGTTGGCATAACCACTAGGAACCCAATCCAAGCCCAAGAGCACGTAATAGCTGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAAGTTCATCGCTCTTTCTGCCGTCCTCCCTGGCCTCAAGAAGATGGACAAGGCTTCAGTGTTGGGAGATGCTATCAAGTATGTGAAACAACTGCAAGAGCGCGTGCAAACTCTGGAGGAGAAAACATCGAAGAGCACAACCAGTTCTTCAGTCCTGTTGAAAAGATCTATTCTCTTTTCTGACGATGAAAATTCTGACAGCCACTGCGACCATTCACTCCCTGAAATCGAAGTCAGAGTTACCGGGAAAGACGTACTCATAAGAACTCAAAGCGATAAACACAGTGGGCGCGCGGCAAAGATACTCAGCGAATTAGAAAAGCTTCATTTCATTGTCCAGAGTAGCAGCCTTTTGCCCTTCGGCAATAACAATATTGATGTAACTATTATTGCTCAGGTAAAAAGTTTATTGTGTAGTACTAGTGAAGAATACTCATGCAATGCAAGTATGCTTTAG 1029 0.4412 MMEIASTNYFPELEMEYLSFLDQYQMDSIACPLDDFDFESFSGSPESNSSYQLNSESTPNCFPAESPDLSFTPPRPTKRLKTFNTFKTCASHLISQNVSASPSSQLISFGHVNASPRASHQFHNLHGKPKIENPSSENMDFTDFVSQGSYEGKSFLSSDNRTNQVGITTRNPIQAQEHVIAERKRREKLSQKFIALSAVLPGLKKMDKASVLGDAIKYVKQLQERVQTLEEKTSKSTTSSSVLLKRSILFSDDENSDSHCDHSLPEIEVRVTGKDVLIRTQSDKHSGRAAKILSELEKLHFIVQSSSLLPFGNNNIDVTIIAQVKSLLCSTSEEYSCNASML* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00762 342 CDD bHLH_AtNAI1_like 175 247 - -
Phac2g00762 342 PANTHER BHLH TRANSCRIPTION FACTOR 14 333 - -
Phac2g00762 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 240 IPR036638 GO:0046983
Phac2g00762 342 SMART finulus 179 228 IPR011598 GO:0046983
Phac2g00762 342 Pfam Helix-loop-helix DNA-binding domain 176 223 IPR011598 GO:0046983
Phac2g00762 342 Coils Coil 212 239 - -
Phac2g00762 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Phac2g00762 342 Gene3D - 168 238 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00762 Phac-Chr2 4660619 4663057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00762 2 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.758 5.04e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g00762 HLH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00762 - - var:108334767 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00762 2 4660619 4663057 Phac2g00762 2 4660619 4663057 ECH
Phac2g00762 2 4660619 4663057 Phac3g03618 3 36298281 36300861 PCT