Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00748 ATGGGTTTTGATCACGATGCCAATACCTCTGGCCTTCACCTCGTTCTAGGGTTATCTTTGACTGCTACCACCACTCCATCCACCAAGCCTCGTGATCATCATCATCATCTTTGTGTTGTTAAGCCTACGCCAACCAAGCCTTATTCCCCCAATGAACCATCTTTAACGTTGGGTTTGTCAGGCGAGAGCTGCCACCTGGCTAAGCAAGTGCCCAGAAATAACAACGTGGCCAACAACAGTAAAGTTTATTGTGAGGATCCTCTTGACATGTCCAGACAGACATCACCTCATAGCGTGGTTTCGTCTTTCTCAACTGGGAGGGTTGTCAAGAGGGAGAGAGATCTTAGCTTTGAAGAGGTAGAGGCAGAGGCCGAGGCAGAAGAGAGGGTTTCTTCAAGAGTGAGCGACGAAGAAGAAGACGGCTCCAATGCTAAGAAGAAACTCAGACTCACCAAAGAACAATCTGCACTACTAGAGGAGAGCTTCAAACAACACAGCACTCTCAATCCTAAACAGAAGCAAGCTTTAGCCAGACAGTTAAATCTACGGCCTCGACAAGTTGAAGTGTGGTTTCAGAATCGGAGAGCCAGAACAAAGCTGAAGCAGACAGAGGTGGACTGTGAGTTCTTAAAGAAATGCTGTGAAACGTTGACGGACGAAAACAGAAGGTTAAAGAAGGAGCTGCAGGAGCTGAAGGCACTGAAACTAACTCAACCCTTGTACATGCCTATGCCTGCGGCAACACTCACCATGTGCCCTTCGTGCGAGAGGCTCGGTGGTGTGAGCGATAGCGCTTCCAATAAAAGCCCCTTCTCCATGGCTCCCAAGCCTCACTTCTACAACCCCTTTGCCAATCCTTCTGCAGCATGTTGA 873 0.4857 MGFDHDANTSGLHLVLGLSLTATTTPSTKPRDHHHHLCVVKPTPTKPYSPNEPSLTLGLSGESCHLAKQVPRNNNVANNSKVYCEDPLDMSRQTSPHSVVSSFSTGRVVKRERDLSFEEVEAEAEAEERVSSRVSDEEEDGSNAKKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLTQPLYMPMPAATLTMCPSCERLGGVSDSASNKSPFSMAPKPHFYNPFANPSAAC* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00748 290 Gene3D - 149 199 - -
Phac2g00748 290 Pfam Homeobox associated leucine zipper 201 235 IPR003106 GO:0006355|GO:0043565
Phac2g00748 290 SMART halz 201 244 IPR003106 GO:0006355|GO:0043565
Phac2g00748 290 Coils Coil 207 237 - -
Phac2g00748 290 ProSiteProfiles 'Homeobox' domain profile. 141 201 IPR001356 GO:0003677
Phac2g00748 290 SUPERFAMILY Homeodomain-like 142 209 IPR009057 -
Phac2g00748 290 CDD homeodomain 145 202 IPR001356 GO:0003677
Phac2g00748 290 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 16 272 - -
Phac2g00748 290 MobiDBLite consensus disorder prediction 24 53 - -
Phac2g00748 290 FunFam Homeobox-leucine zipper protein 18 129 206 - -
Phac2g00748 290 ProSitePatterns 'Homeobox' domain signature. 176 199 IPR017970 GO:0000981|GO:0006355
Phac2g00748 290 Pfam Homeodomain 145 199 IPR001356 GO:0003677
Phac2g00748 290 SMART HOX_1 143 205 IPR001356 GO:0003677
Phac2g00748 290 MobiDBLite consensus disorder prediction 126 149 - -
Phac2g00748 290 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00748 Phac-Chr2 4539840 4542058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00748 1 290 Homeobox Transcription Factor Family AT4G37790 59.272 4.22e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac2g00748 Homeodomain 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00748 K09338 - gmx:100784129 461.07