Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00741 ATGAAGCCTGTCGAAAATGGCGATACCGTTAACATAAACTATCAAAATAGCTGGTTAGGCTTCTCCCTCTCCCCACAAATGATGAGTATAGTTGTTCCTTCACAGTCTCATCAAACACAGCCTTCATCTGCTGCTGCTGAAACAATTCCACCAACATATTACCACCACACACCTCTTCATAACTATGGACTTCAAGGTGAACATGTTGGAATGTGTTCTTCCTTGCCTATCATGCCCCTTAAATCCAATGTCTCGTTCTATGGAATAGAAGCTATGAGCAGATCACAAGCACAAGCAATGACAACTACTTCCGCAATACCTCTGAGCTTGGATAGTATGCTTTACAACCAGCTCTCTTGTCATGGATCGAACGATCCAAATAACCAAAACCATGTACAAGAGAACATCAGCCAGCAACAACTATCATACTATTCTTCCTTAAGAAACCATGATGTGATTTTAGAAGGGTCTAAGCACCAACTCCCTTGTATAGCTGAGGATGAAGCTGCTTGTCTTAAAAGTTGGTTCTCAAGGGAGGACTTTCCTGCTTGTCAAGTGCAGGAGTCAAGGATGTTTGTTCCTTTGGAGGATAATGGAAGCAAATCTGGATCCATTGGATCAATAACATATGAGGATTTACATTCATTGAATTTGTCTGTGAGCCCTAGGAGACGATCAAGCTGTGTCACAGGCTCGCCTGGTATCACTGATACGAAGAAAAGGGGGCTTGAAATGGTGGACCAGAATCAGAAGCAAATAGTTCATAGGAAATCCATAGACACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAGGTTTATCTGGGGGGCTATGATATGGAAGAAAAGGCTGCAAGAGCTTACGACATGGCCGCACTCAAGTATTGGGGACCCTCTTCTCATATAAATTTCCCATTGGAAAATTATCAAAACGAACTTGAGGAAATGAAAAACTTAACGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAGGAGCATCCATGTATAGAGGAGTAACAAGGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGGAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACCCAAGAGGAAGCAGCAGAAGCCTATGATATTGCTGCCATTAAATTCAGAGGAGTTAATGCTGTTACTAACTTTGATATAATAAGATATGACGTGGAAAAAATTATGGCAAGCGACAACCTTCTTAGCAGTGAACAAGCTAAGCGGAACAGACCGAAAGAGGATGGCACAAGAAACGAGGCCTTTGTTAACCAAAATCCTTGTACATATCAACACGCTAAGGAAACCGTTCTAATGCAGAAAAGCTGCAAGATGGTTCCCGATCCATCATTCCAACAGCTTCACCAAAATCCACCAAGAATTGAGAGTTGTAGAACGGTTATATTTCATCAAGAAGAAGTAGAGGAATCGAGTAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAGCTTGCCAATGCTCTTTGGAATGCCTTCAACAGTGTCTAAATCATTCACTAACATTCCAACAAGTGACGAAGATTCTTGGGAGCTATCGTCCAATTTGAGGCCAGCTCTTTCTTTGCCTCAGATGCCAAATTTTGCTTCCTGGACCGACGCATAA 1797 0.4263 MKPVENGDTVNINYQNSWLGFSLSPQMMSIVVPSQSHQTQPSSAAAETIPPTYYHHTPLHNYGLQGEHVGMCSSLPIMPLKSNVSFYGIEAMSRSQAQAMTTTSAIPLSLDSMLYNQLSCHGSNDPNNQNHVQENISQQQLSYYSSLRNHDVILEGSKHQLPCIAEDEAACLKSWFSREDFPACQVQESRMFVPLEDNGSKSGSIGSITYEDLHSLNLSVSPRRRSSCVTGSPGITDTKKRGLEMVDQNQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSSHINFPLENYQNELEEMKNLTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDIIRYDVEKIMASDNLLSSEQAKRNRPKEDGTRNEAFVNQNPCTYQHAKETVLMQKSCKMVPDPSFQQLHQNPPRIESCRTVIFHQEEVEESSNMGTHLSNPSSLVTSLSSSREESPDKTSLPMLFGMPSTVSKSFTNIPTSDEDSWELSSNLRPALSLPQMPNFASWTDA* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00741 598 PRINTS Ethylene responsive element binding protein signature 410 430 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 PRINTS Ethylene responsive element binding protein signature 269 280 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 ProSiteProfiles AP2/ERF domain profile. 370 428 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 Gene3D AP2/ERF domain 267 336 IPR036955 GO:0003700|GO:0006355
Phac2g00741 598 Gene3D AP2/ERF domain 370 430 IPR036955 GO:0003700|GO:0006355
Phac2g00741 598 SUPERFAMILY DNA-binding domain 267 336 IPR016177 GO:0003677
Phac2g00741 598 CDD AP2 267 334 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 Coils Coil 335 355 - -
Phac2g00741 598 MobiDBLite consensus disorder prediction 518 551 - -
Phac2g00741 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 192 498 - -
Phac2g00741 598 Pfam AP2 domain 268 326 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 Pfam AP2 domain 371 420 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 CDD AP2 369 429 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 SMART rav1_2 268 340 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 SMART rav1_2 370 434 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 SUPERFAMILY DNA-binding domain 369 428 IPR016177 GO:0003677
Phac2g00741 598 MobiDBLite consensus disorder prediction 518 545 - -
Phac2g00741 598 FunFam AP2-like ethylene-responsive transcription factor 369 430 - -
Phac2g00741 598 ProSiteProfiles AP2/ERF domain profile. 268 334 IPR001471 GO:0003700|GO:0006355
Phac2g00741 598 FunFam AP2-like ethylene-responsive transcription factor ANT 267 336 - -
Phac2g00741 598 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00741 Phac-Chr2 4398308 4402598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00741 1 598 AP2-EREBP Transcription Factor Family AT4G37750 42.383 1.42e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac2g00741 AP2 5.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00741 K09285 - gmx:100794433 925.235