Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00724 ATGGGTGCTCCTAAGCAAAAATGGACTGCAGAAGAAGAAGCAGCATTGAAAGCTGGAGTTGTCAAACATGGGGCTGGAAAATGGCGCACCATACTTACCGACCCCGAGTTCAGTTCCATTCTGCGCATGCGTTCTAATGTTGATCTCAAGGACAAATGGAGGAACATAAATGTGACGGCAATATGGGGATCAAGGCAGAAGGCAAAGCTTGCTCTTAAAAAGAACCTACTACCATCCCCCAAAATTGACAATAATCACATGGCCTTGAGTACTGTAGTTCAACGTGACAGAGGAGCTACAGATTCCAAGCCTTTGGCAGTTTCTGGTGGAATATCTCCTAATTCAAAGGAAAAAGTATCAAGGCCACAGAACTTCCAGTTGGATACTCTTATATTAGAGTCTATTATCAAGTTGAAGGAGCCAAAGGGTTCTGACAGGGCAGCAATTGCTTCATATATAGAGGATCAATACTGTTCTACGCCTACCCTCAGAAAGTTACTGTCAACAAAACTGAAGCACATGGTGGCAAGTAAAAAATTAATGAAGGTAAAGCATAAGTACAGGATTGCAACAAATTTAACTATCTCTGAGAAAAGATGTTCTTCCTTGTTACTACTGGAAGGGAGGCCCAAAGATTCTCCAAAAACTGAGAAGACTGGTGTCAACATTCTTTCAAAATCCGAAATTGATGCAGAGCTATCAAAAATGAAGGGTGTGACACCACAAGAGGCAGCAGCAGCTGCTGCAAAAGCAGTTGCTGAGGCGGAAGCTGCCATTGCTGAGGCTGAGGCAGCAGCTAGGGAGGCAGATGCTGCAGAAGCCGAGGCAGAGGCTGCACGAGTGTTTGCAAAAGCAGCAATAAAGGCACTAAAATGCAAGACACTTCACATTTGGTAA 897 0.4404 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLLPSPKIDNNHMALSTVVQRDRGATDSKPLAVSGGISPNSKEKVSRPQNFQLDTLILESIIKLKEPKGSDRAAIASYIEDQYCSTPTLRKLLSTKLKHMVASKKLMKVKHKYRIATNLTISEKRCSSLLLLEGRPKDSPKTEKTGVNILSKSEIDAELSKMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAIKALKCKTLHIW* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00724 298 Gene3D - 2 59 - -
Phac2g00724 298 Coils Coil 245 279 - -
Phac2g00724 298 Gene3D - 120 199 IPR036388 -
Phac2g00724 298 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Phac2g00724 298 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Phac2g00724 298 CDD SANT_TRF 6 57 - -
Phac2g00724 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Phac2g00724 298 SMART h15plus2 121 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00724 298 FunFam Telomere repeat-binding factor 1 2 58 - -
Phac2g00724 298 PANTHER SINGLE MYB HISTONE 4 1 293 IPR044597 GO:0003691
Phac2g00724 298 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 123 191 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00724 298 Pfam linker histone H1 and H5 family 128 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00724 298 SUPERFAMILY "Winged helix" DNA-binding domain 122 200 IPR036390 -
Phac2g00724 298 SUPERFAMILY Homeodomain-like 2 68 IPR009057 -
Phac2g00724 298 SMART sant 4 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00724 Phac-Chr2 4218640 4223705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00724 1 240 Single Myb Histone (SMH) Gene Family AT1G49950 48.571 7.89e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac2g00724 Linker_histone 5.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00724 K09422 - gmx:778165 454.136