Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00723 ATGGGTGCTCCTAAGCAAAAATGGACTGCAGAAGAAGAAGCAGCATTGAAAGCTGGAGTTGTCAAACATGGGGCTGGAAAATGGCGCACCATACTTACCGACCCCGAGTTCAGTTCCATTCTGCGCATGCGTTCTAATGTTGATCTCAAGGACAAATGGAGGAACATAAATGTGACGGCAATATGGGGATCAAGGCAGAAGGCAAAGCTTGCTCTTAAAAAGAACCTACTACCATCCCCCAAAATTGACAATAATCACATGGCCTTGAGTACTGTAGTTCAACGTGACAGAGGAGCTACAGATTCCAAGCCTTTGGCAGTTTCTGGTGGAATATCTCCTAATTCAAAGGAAAAAGTATCAAGGCCACAGAACTTCCAGTTGGATACTCTTATATTAGAGTCTATTATCAAGTTGAAGGAGCCAAAGGGTTCTGACAGGGCAGCAATTGCTTCATATATAGAGGATCAATACTGTTCTACGCCTACCCTCAGAAAGTTACTGTCAACAAAACTGAAGCACATGGTGGCAAGTAAAAAATTAATGAAGGTAAAGCATAAGTACAGGATTGCAACAAATTTAACTATCTCTGAGAAAAGATGTTCTTCCTTGTTACTACTGGAAGGGAGGCCCAAAGATTCTCCAAAAACTGAGAAGACTGGTGTCAACATTCTTTCAAAATCCGAAATTGATGCAGAGCTATCAAAAATGAAGGGTGTGACACCACAAGAGGCAGCAGCAGCTGCTGCAAAAGCAGTTGCTGAGGCGGAAGCTGCCATTGCTGAGGCTGAGGCAGCAGCTAGGGAGGCAGATGCTGCAGAAGCCGAGGCAGAGGCTGCACGAGTGTTTGCAAAAGCAGCAATAAAGGCACTAAAATGCAAGACACTTCACATTTGA 894 0.4407 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLLPSPKIDNNHMALSTVVQRDRGATDSKPLAVSGGISPNSKEKVSRPQNFQLDTLILESIIKLKEPKGSDRAAIASYIEDQYCSTPTLRKLLSTKLKHMVASKKLMKVKHKYRIATNLTISEKRCSSLLLLEGRPKDSPKTEKTGVNILSKSEIDAELSKMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAIKALKCKTLHI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00723 297 Gene3D - 2 59 - -
Phac2g00723 297 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Phac2g00723 297 Coils Coil 245 279 - -
Phac2g00723 297 Gene3D - 120 199 IPR036388 -
Phac2g00723 297 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Phac2g00723 297 SUPERFAMILY "Winged helix" DNA-binding domain 122 200 IPR036390 -
Phac2g00723 297 CDD SANT_TRF 6 57 - -
Phac2g00723 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Phac2g00723 297 SMART h15plus2 121 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00723 297 PANTHER SINGLE MYB HISTONE 4 1 293 IPR044597 GO:0003691
Phac2g00723 297 FunFam Telomere repeat-binding factor 1 2 58 - -
Phac2g00723 297 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 123 191 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00723 297 Pfam linker histone H1 and H5 family 128 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac2g00723 297 SUPERFAMILY Homeodomain-like 2 68 IPR009057 -
Phac2g00723 297 SMART sant 4 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00723 Phac-Chr2 4218321 4223705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00723 1 239 Single Myb Histone (SMH) Gene Family AT1G49950 48.770 5.88e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac2g00723 Linker_histone 5.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00723 K09422 - gmx:778165 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00723 2 4218321 4223705 Phac3g03689 3 36837441 36846298 PCT