Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00714 ATGGGGAAAAAGCAGCACAGCAAAGACAGGATGTTCATCACCAAAACGGAGTGGGCAACGGAATGGGGAGGAGCTAAATCCAAAGACAATCGCACTCCCTTCAAACGTCTCCCCTTCTATTGCTGCTCGCTTACGTTTACGCCGTTTGGAGAACCTGTCTGCACTTCTGATGGCAGTGTTTTCGATATTATGAATATTACTCCCTATATTATAAAATACGGTAAACATCCGGTCACTGGAACTCCTCTCAAGCTGCCGGATCTCATTCCACTAACTTTCCACAAGAATTCAGAAGGAGAATATCATTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACTCATATTGTGGCAGTGAAAACTACAGGAAATGTGTTCTGCTATGAGGCTGTTAAAGAGTTAAACATTAAGACAAAAAACTGGAAGGAGCTCCTCACTGATGAACCATTCACAAGGGAAGACCTTATAACCATTCAGAATCCTAATGCACTTGACAACAAGGTTCTTCTGGATTTTGATCATGTTAAAAATAGTTTGAAAGTTGATGATGAGGAACTACAGAAAATGAGTTCAGATCCAACCTATAACATAAACATGTCGGGTGATATCAAGCAAATGCTTCAGGAGCTTGGAACTGATAAAGGAAAGGAAACTGCAATGCATGGGGGTGGTGGTGGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTGCTGCCATCATAGTGGCAAGGTCCCGTGTTGATGAAGATTCCAAATCAAATCCAAATAAAGAGGCCAAAGCTCCTCAGGCATTTAGTATTGTAGATGCTGCATCTGCTGCAGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAGGTGATAAAACTGCTGCTAGAATAGCTATGCATATGTCTGGTGACAGGGCGCCAGTGAATGCAAAGATGGTAAAAAGTCGTTTCACAACTGGTGCTGCTTCCCGGTCTTTTACTTCTACATCATTTGATCCAGTTACAAAAAATGAATTTGAATATGTGAAAGTTGAGAAGAATCCAAAAAAGAAGGGTTATGTACAACTGCATACAACACATGGTGATTTGAACATTGAGCTACATTGTGATATAACACCTAGGACGTGTGAAAACTTCATCACACTTTGTGAGCGTGGATTTTATAACGGAGTTGCTTTTCATAGAAGCATCAGGAATTTTATGCTACAGGGTGGTGATCCCACTGGTACTGGTCGAGGAGGTGAATCTATATGGGGAAAGCCTTTTAAAGATGAATTTAACTCCAAACTAGTTCACTCTGGAAGGGGTGTGGTAAGCATGGCAAACAGTGGCCCACACACCAATGGTTCCCAATTCTTCATCTTGTACAAGTCTGCAAATCATCTAAACTTCAAACATACAGTTTTTGGAGTAGTTGTAGGTGGGTTGACCACACTTGCTGCCATGGAAAAGGTTCCAGTTGATGATAATGACCGACCTCTGGAGGAAATCAAGATAACAAGTGTCACGATTTTTGTCAATCCTTACACAGAACCAGACGAAGGAGAAGAGCAGGATAAGGCCAAAGAGAAGAATTTAGAGGACGAGGATAATGGTAAGGTAGGCTCATGGTATAGCAATCCTGGCGCTGGAACGTCTGAATCTGGAGGTACGGGGATCGGTGGTGGTGTCGGCAAGTACTTGAAAGCTAGGAATGCTCAAGCTACATCTACTAATCTTGATACCAGTACAGCCGTTGTAGTAAAGAAAAGAAAAGTGGGAGTTGCCAGCAGTGACTTTAAAGATTTTTCTGCATGGTAA 1791 0.4227 MGKKQHSKDRMFITKTEWATEWGGAKSKDNRTPFKRLPFYCCSLTFTPFGEPVCTSDGSVFDIMNITPYIIKYGKHPVTGTPLKLPDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFTREDLITIQNPNALDNKVLLDFDHVKNSLKVDDEELQKMSSDPTYNINMSGDIKQMLQELGTDKGKETAMHGGGGGKAQKERAAALAAIIVARSRVDEDSKSNPNKEAKAPQAFSIVDAASAAVHGRSAAAAKASSGDKTAARIAMHMSGDRAPVNAKMVKSRFTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGFYNGVAFHRSIRNFMLQGGDPTGTGRGGESIWGKPFKDEFNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGVVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEGEEQDKAKEKNLEDEDNGKVGSWYSNPGAGTSESGGTGIGGGVGKYLKARNAQATSTNLDTSTAVVVKKRKVGVASSDFKDFSAW* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00714 596 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 331 515 - -
Phac2g00714 596 CDD cyclophilin_RING 350 508 - -
Phac2g00714 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Phac2g00714 596 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Phac2g00714 596 MobiDBLite consensus disorder prediction 510 528 - -
Phac2g00714 596 SUPERFAMILY RING/U-box 37 104 - -
Phac2g00714 596 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755|GO:0006457
Phac2g00714 596 Gene3D - 331 514 IPR029000 -
Phac2g00714 596 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Phac2g00714 596 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 MobiDBLite consensus disorder prediction 505 548 - -
Phac2g00714 596 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Phac2g00714 596 SUPERFAMILY Cyclophilin-like 350 509 IPR029000 -
Phac2g00714 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 500 IPR002130 GO:0000413|GO:0003755
Phac2g00714 596 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 344 515 IPR044666 -
Phac2g00714 596 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00714 Phac-Chr2 4147397 4156990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00714 1 596 U-box Gene Family AT5G67530 76.080 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00714 K10598 - gmx:100819923 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00714 2 4147397 4156990 Phac2g00714 2 4147397 4156990 ECH