Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00646 ATGTCTCACCCACCATCACCCTCTTTCCTCCTCTGTCATGAACAACACTCCTCTTTCCAACAACATTCTCCAACTCTCATCACCACCCCATCTTCACCTTCCATTTTTTCCGACAACCACCTCTTCTCCCAACACGACCACCTTCTCTCTCTACTCTCCAAAGAGACCGCAACGCATTTCACTCCCTCCCCTTCCCACCACGTCGTACGCTGGATTTCTACACTTTCCCACTTCCACGGTTTCGCTCCTCTCACCACCGTTCTTGCCGTGAACTACTTCTACAGGTTCGTTAACAGAAGAAGCTTTCAGAGCGAAGATAAACCATGGAGGACTCAACTAGCAGCCGTTGCTTGCGTCTCTCTCGCGGCCAAAGTGGAAGAGACACGAGTGCCGCTTCTTTTGGAGTTGCAAGTGGAGGAATCGAAATTTGTGTTTGAAGCGAACACCATACATACAATGGAGCTCCTCGTGCTGTCCACTCTCGAATGGAAAATGAACCCTGTCACCCCAATCTGTTTCTTTCAACACTTTCTCACAAGGCTTGCTTTAAAGCCTCACTTGCACTGGGAATTTCTTTGTGGGTGCCAACATGTTCTTCTCTCTGTCATCGCCGATTCAAGGGTTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTATTGAAGAGATTGAACCATTGAATGCTAGGGAGTACCGAAATCAGCTTCTTGGTTTACTCAGAAGTAGTGAGGAGCAAGTGAATGAGTGCTACAAACTGATGCTGGGACTATTAGTTTGCTGTGAAGGGATTCACAATCCTGGTCAGAGGCGCAAACGTTTCTCTGAGCCAAGTAGCCCTGATGGGGTCATTGATGCATCTTTCTGCTGTGAAAGTTCAAATGATTCATGGTCAGTGGCATCACTTTCTGTGGAGCCAGAGTTTAAGAGGAGGAAAGCTCAGGACCAGCAGATGCGTTTGCCTTCAGTGGATCGAGTGTCTATTGGTGTTCTAAATATTCCTCGTCAATAA 1023 0.4712 MSHPPSPSFLLCHEQHSSFQQHSPTLITTPSSPSIFSDNHLFSQHDHLLSLLSKETATHFTPSPSHHVVRWISTLSHFHGFAPLTTVLAVNYFYRFVNRRSFQSEDKPWRTQLAAVACVSLAAKVEETRVPLLLELQVEESKFVFEANTIHTMELLVLSTLEWKMNPVTPICFFQHFLTRLALKPHLHWEFLCGCQHVLLSVIADSRVMSYLPSTLAAAIMIHVIEEIEPLNAREYRNQLLGLLRSSEEQVNECYKLMLGLLVCCEGIHNPGQRRKRFSEPSSPDGVIDASFCCESSNDSWSVASLSVEPEFKRRKAQDQQMRLPSVDRVSIGVLNIPRQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00646 340 FunFam CYCLIN D32 167 256 - -
Phac2g00646 340 PANTHER CYCLINS 62 269 IPR039361 -
Phac2g00646 340 Pfam Cyclin, N-terminal domain 60 166 IPR006671 -
Phac2g00646 340 FunFam D6-type cyclin 46 166 - -
Phac2g00646 340 SMART cyclin_7 70 159 IPR013763 -
Phac2g00646 340 CDD CYCLIN_AtCycD-like_rpt2 168 258 - -
Phac2g00646 340 SMART Cyclin_C_2 168 296 IPR004367 -
Phac2g00646 340 Gene3D - 167 256 - -
Phac2g00646 340 SUPERFAMILY Cyclin-like 47 166 IPR036915 -
Phac2g00646 340 Pfam Cyclin, C-terminal domain 168 268 IPR004367 -
Phac2g00646 340 CDD CYCLIN_AtCycD-like_rpt1 69 163 - -
Phac2g00646 340 Gene3D - 56 166 - -
Phac2g00646 340 SUPERFAMILY Cyclin-like 149 263 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00646 Phac-Chr2 3617798 3620315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00646 45 329 Core Cell Cycle Gene Families AT5G67260 46.711 8.08e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00646 K14505 - gmx:100802683 485.337