Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00640 ATGTACTGGTATTCATGCGTAATAATTTTGACTATTGCCTATCATTTTTCAGTGTGCTGCACCTGCTCTTTCAGTGCATTTGTTCTTTATGTTCTACTTAAAAGTTGGAAATTTGAGTCAACATGCCAAGAGCTTATGATTGTAAATGTTGCAACTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTCTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACTGGACTGATGATATGTTGTCTTCTTTTGTTTCTAAAGTTCTTCCCAACTGCAGAAGAAGCCATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAGTCCTCCCTAGTCAAATAAGATATGTAAAATACTTTGAACGGACTTTAACACAATTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATACTTAGAGGGTTCCGGCTTCACAAGTGCCCTTATTGGGTTAGACCATCTATTACAATTTCTGATCATAAGGGAGTTCTGTTTGCCACAAAAAACCATCCCAAAACAAAAGATCTATTGCCAGAAGATTTCTGGATCAGTGCACCGAAGAAAGGAATTGTGGTTTTTGCACTACCAGGAGAACCTGGTCTGACGGAGTTGGTAGGAGACTTCAAAATTCATTTTAATGATAGACATGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAATCGAAAAATTTTAGATGGTTCAGATTTTGATGGTTTCGACAAGAGGAAGATCCCCGCTCCAGGATTCCGGGTGGAAGTTGTCATGATAGACTATAATGGCACCCTACCTGAAAGAACAAAAGCCAATCCCGCCAGCGAAGGATCTGACGGAAACACAACCAATGCCCTACCTGGTCCAAAGCCTACTACTTCTAATTCAACTGAGAGTAAACTCCCAAGAACTGGAGATGATGATGTATTCTCAGACAGTGATGAAGAGGAGAGCCGAGATACACAAAGCAAGAAAGCTGCAACTGAGTACAAATTTATGGCACCTCATCAAGTATCTGAGGGGATAACAGACCATGTAGGGATGTTGACACACACAACGGATCGGTTGTCACTACAGCATGAGGCACGCAGGCAAGACAATTATTCTGAAGAATCAACTGCAGATAAACATCATAAAATTCATACAGGCAATAGCAGCACAAACGTGGGATCTGTAGGGGCAAGTGACATCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCCTTCGGGGATGAAGACTTTGAAAGTGATTGA 1323 0.4074 MYWYSCVIILTIAYHFSVCCTCSFSAFVLYVLLKSWKFESTCQELMIVNVATFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICCLLLFLKFFPTAEEAIDYFNHKRCVDGKALVLPSQIRYVKYFERTLTQFNGEVQPGRRCILRGFRLHKCPYWVRPSITISDHKGVLFATKNHPKTKDLLPEDFWISAPKKGIVVFALPGEPGLTELVGDFKIHFNDRHGDFYCWMNTTMTENRKILDGSDFDGFDKRKIPAPGFRVEVVMIDYNGTLPERTKANPASEGSDGNTTNALPGPKPTTSNSTESKLPRTGDDDVFSDSDEEESRDTQSKKAATEYKFMAPHQVSEGITDHVGMLTHTTDRLSLQHEARRQDNYSEESTADKHHKIHTGNSSTNVGSVGASDIKAIAADASVFSFGDEDFESD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00640 440 MobiDBLite consensus disorder prediction 385 405 - -
Phac2g00640 440 ProSitePatterns Tyrosine specific protein phosphatases active site. 87 97 IPR016130 GO:0016311|GO:0016791
Phac2g00640 440 MobiDBLite consensus disorder prediction 290 353 - -
Phac2g00640 440 Pfam Protein-tyrosine phosphatase 56 110 IPR000242 GO:0004725|GO:0006470
Phac2g00640 440 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 85 124 IPR000387 GO:0016311|GO:0016791
Phac2g00640 440 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 49 401 - -
Phac2g00640 440 MobiDBLite consensus disorder prediction 291 323 - -
Phac2g00640 440 Gene3D Protein tyrosine phosphatase superfamily 30 156 IPR029021 -
Phac2g00640 440 SMART PTEN_C2_2 155 283 IPR014020 -
Phac2g00640 440 MobiDBLite consensus disorder prediction 385 413 - -
Phac2g00640 440 ProSiteProfiles C2 tensin-type domain profile. 157 284 IPR014020 -
Phac2g00640 440 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 33 147 IPR029021 -
Phac2g00640 440 ProSiteProfiles Phosphatase tensin-type domain profile. 1 150 IPR029023 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00640 Phac-Chr2 3597361 3607272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00640 50 440 Protein tyrosine phosphatase (PTP) family AT3G19420 59.102 1.86e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00640 K01110 - gmx:100801622 705.671