Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00636 ATGCCTGTGGAGCTCATGATGGGGTATAGGAACGACAGTTTCGCCGAAGAGAATGCGGTTCGTGAAGCTGCGTCGGGGCTAGAGAGCGTCGAGAAGCTCATCAGGTTGCTGTCACGCGCCCAACTGCAACAGCAGCAGCAGCAACAGCAACAACAATCGCACGCATCCAATTCAAAGTCTTCCATGGAAATTGAATCCGATTACGGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTCATTTCGCTTCTGGGCCGAACCAGAACCGGCCACGCGCGTTTCAGAAGAGCCCCCGTGCCTCCGCCACCTCCTTCGGAACCCAGATTCTACCGTGCAACGCCGCTGCAGCAGATCCCGCCGCCCCCCGAACACCCTTTCATCCCTAAAAATGGACTGATTGACACAAAGGACTCTTCCAAGACCATCAATTTCTCCTATTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACACCAAACAGCCCTCTTCCTCGTCGCCTGCGGCGGCGGCTGCGACGGCAGCGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCGGGAAAGCCTCCTCTTTCTTCGTCTTCGTTGAAGAGGAAGTGTAGCTCTGAGAATTTGGGTTCTGCCAATTGCGGGAGTTCCTCTAGCCGATGCCATTGCTCAAAGAAGAGTAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCCGCAATAAGTTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGGAAATACGGACAGAAACCCATTAAAGGATCTCCTCATCCAAGGGGCTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAGCATGTAGAGAGGGCTTTGGATGACCCAGCTATGTTGGTAGTCACCTATGAAGGTGAACACAATCACTCACTCTCTGCAGTCGAAGCTACTACTAATCTCATCCTAGAATCTTCTTAG 975 0.5251 MPVELMMGYRNDSFAEENAVREAASGLESVEKLIRLLSRAQLQQQQQQQQQQSHASNSKSSMEIESDYGAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPPPPPSEPRFYRATPLQQIPPPPEHPFIPKNGLIDTKDSSKTINFSYSNSFVSSLTGDTDTKQPSSSSPAAAAATAAPFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSANCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHSLSAVEATTNLILESS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00636 324 Pfam WRKY DNA -binding domain 252 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g00636 324 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g00636 324 FunFam WRKY transcription factor 65 234 311 - -
Phac2g00636 324 Pfam Plant zinc cluster domain 202 248 IPR018872 -
Phac2g00636 324 SUPERFAMILY WRKY DNA-binding domain 247 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g00636 324 Gene3D WRKY domain 237 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac2g00636 324 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac2g00636 324 MobiDBLite consensus disorder prediction 41 63 - -
Phac2g00636 324 Coils Coil 30 50 - -
Phac2g00636 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 316 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00636 Phac-Chr2 3561946 3564625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00636 1 314 WRKY Transcription Factor Family AT2G24570 45.322 1.27e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac2g00636 WRKY 4.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00636 - - gmx:100804089 430.254