Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00624 ATGGAGGGTGAAGGAAGAAGAGAAGGGGAGAGAGAACCGACCAGGAAGCGAAGCGGCGTGGCGGTGGCGGTCGAGGGAGAGAGAAGATACAAAGGAATAAGGATGAGGAAGTGGGGCAAGTGGGTCGCGGAAATTAGGGAACCCAATAAGCGTTCAAGGATTTGGCTCGGTTCCTATTCCACCCCCGTCGCCGCCGCTCGTGCTTACGACACCGCCGTCTTCTACCTCCGGGGACCCTCCGCGCGCCTCAACTTCCCCGACCTTCTTGTCGGAGAGGGCACCGCCCTTGTCGCCGGTTGCGACATGTCAGCTGCCTCTATTAGGAAGAAGGCCACCGAGGTCGGTGCCAGAGTTGATGCTCTACAGGCAACCCTGCACCACCACCACGTGGCGCCGGCGGCACAGGAGCTTCTCTCGCGCGGCGACGGAGGTGGGTCCGGGGATTTCGCGGTTGACCTGAACAAGATGCCTGAACCCGAGAGTGAGGACTGCGAATGGGATGTGAATTGA 510 0.6059 MEGEGRREGEREPTRKRSGVAVAVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLVGEGTALVAGCDMSAASIRKKATEVGARVDALQATLHHHHVAPAAQELLSRGDGGGSGDFAVDLNKMPEPESEDCEWDVN* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00624 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 23 163 - -
Phac2g00624 169 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 MobiDBLite consensus disorder prediction 148 169 - -
Phac2g00624 169 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Phac2g00624 169 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Phac2g00624 169 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Phac2g00624 169 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00624 Phac-Chr2 3446307 3448209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00624 17 163 AP2-EREBP Transcription Factor Family AT3G50260 61.905 6.73e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00624 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00624 K09286 - gmx:100527066 253.832