Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00621 ATGTGGGATCTGAATGACTCTCCCGATCAGAGGAAGGACTACGAATCTGAAGGTTGCTCTTCTTCGCTGAATGATGATAAAGGCGATAAAGGCAAGAGAGTGGGATCTGTTTCAAATTCAAGCTCCTCTGCTGTGGTCCTCGAAGATGGATCGGAAGAAGAAGACAGTGACAGGGGTGGAAGCAGAACATTGGAGAAAAAAAGCAGTAAAATATTCGGCTTTTCAGTTACACACGATGACAGTGACCACCCACCTGTCACCCGGCAGTTTTTTCCGGTGGAGGATTCCGACCTTCCTGTCTCTGAAGCCGCCGCCGGCGGAAGCTCTTCCTTCCCACGTGCTCACTGGGTAGGCGTCAAATTTTGTCAATCGGAAGCTCTTGGCGCCGGCAAATCAGTGAAAGTGTCGGAGCCCATGAAGAAAAGTCGGCGAGGGCCACGGTCGCGAAGCTCACAGTATCGCGGAGTTACCTTTTACAGGAGAACCGGTCGATGGGAGTCTCATATATGGGATTGTGGAAAGCAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCCATTAAGTTCCGGGGGGTGGACGCAGATATCAACTTCAACATAGAAGACTATGAGGAAGACTTGAAGCAGATGAGCAATTTAACCAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGATTTCCGAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTGGGCAAAAAGTACGTTTATCTGGGTCTTTTTGACACCGAGATTGAAGCTGCAAGGGCATATGACAAGGCGGCGATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGATAATGAACTTAATTCTGAATCCTCAGGTGTAGCTGCAGATCACAATCTGGATTTGAGTTTGGGCAATTCGAGCTCTAAACATGGGAATGGTCAAATATCGGGGAATCACTTCCCAAATTCTGCGACCGATCAGCCCATACCACCTGAATCCAATTGGCGGAATGGAGGATCTAAGCCTAAGGCTCATCTGGTAAATATACTACCAAAACCATGTGGTAGAAGCAACATGGAAGGCTATGCAAGAGATGGGCTCGGGGAGAGTGAAACCTTGAGACTACTAAGCCAAACTCACCTTCAATCTCCAACGGCTAAAGAAATGCATAGATATGGTCCGTATAGGTCGCCTGCTGAGTCTCAAATGCCTCATAATTTTGCACATCTTCACCTACCGAATTTTCATGTTCCTAGCAGCAGCAACGGAGGCCGTATTGGAAGCGATCTTTCGTTATCAATGTCTGATCAACAGCAATGGCAAGCCGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCTCAGATTAGACCCTCCCTAGGTTGGCAGCAGAAAAATGGGTTCCACTCCCTCATGAGACCTTCATGA 1512 0.4808 MWDLNDSPDQRKDYESEGCSSSLNDDKGDKGKRVGSVSNSSSSAVVLEDGSEEEDSDRGGSRTLEKKSSKIFGFSVTHDDSDHPPVTRQFFPVEDSDLPVSEAAAGGSSSFPRAHWVGVKFCQSEALGAGKSVKVSEPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGVAADHNLDLSLGNSSSKHGNGQISGNHFPNSATDQPIPPESNWRNGGSKPKAHLVNILPKPCGRSNMEGYARDGLGESETLRLLSQTHLQSPTAKEMHRYGPYRSPAESQMPHNFAHLHLPNFHVPSSSNGGRIGSDLSLSMSDQQQWQAGPPHLLATAAASSGFPPQIRPSLGWQQKNGFHSLMRPS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00621 503 MobiDBLite consensus disorder prediction 484 503 - -
Phac2g00621 503 FunFam AP2-like ethylene-responsive transcription factor 151 210 - -
Phac2g00621 503 Pfam AP2 domain 243 292 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 Pfam AP2 domain 152 200 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 SMART rav1_2 152 214 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 SMART rav1_2 244 307 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 CDD AP2 152 209 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 MobiDBLite consensus disorder prediction 133 152 - -
Phac2g00621 503 SUPERFAMILY DNA-binding domain 243 303 IPR016177 GO:0003677
Phac2g00621 503 CDD AP2 243 303 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 Gene3D AP2/ERF domain 151 210 IPR036955 GO:0003700|GO:0006355
Phac2g00621 503 Gene3D AP2/ERF domain 243 302 IPR036955 GO:0003700|GO:0006355
Phac2g00621 503 PRINTS Ethylene responsive element binding protein signature 245 256 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 PRINTS Ethylene responsive element binding protein signature 283 303 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 ProSiteProfiles AP2/ERF domain profile. 244 301 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 ProSiteProfiles AP2/ERF domain profile. 152 208 IPR001471 GO:0003700|GO:0006355
Phac2g00621 503 MobiDBLite consensus disorder prediction 321 357 - -
Phac2g00621 503 MobiDBLite consensus disorder prediction 1 65 - -
Phac2g00621 503 MobiDBLite consensus disorder prediction 1 33 - -
Phac2g00621 503 MobiDBLite consensus disorder prediction 482 503 - -
Phac2g00621 503 SUPERFAMILY DNA-binding domain 151 209 IPR016177 GO:0003677
Phac2g00621 503 FunFam AP2-like ethylene-responsive transcription factor 243 303 - -
Phac2g00621 503 MobiDBLite consensus disorder prediction 438 464 - -
Phac2g00621 503 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 399 - -
Phac2g00621 503 MobiDBLite consensus disorder prediction 321 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00621 Phac-Chr2 3406493 3410490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00621 1 333 AP2-EREBP Transcription Factor Family AT4G36920 69.914 2.15e-137 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac2g00621 AP2 3.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00621 K09284 - gmx:100786333 861.677