Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00610 ATGTTTTTTTTTTATCGTAATACTGTCGGCTCCCAGTTAAACACTGTAACACCAACATGTGTAACTTTTTCTTTCTTTCGGGAGGGTGTCGAAGCTTTCGCCGAAGAAGTTCCGACAAAACCTGTTCCTTCAAGGAGTTCATCTAAGAGATCAAGAGCTGCAGAAGTTCATAATTTGTCTGAGAAGCGAAGAAGGAGTAGGATCAACGAGAAAATGAAGGCCTTGCAAAATCTAATTCCGAATTCAAACAAGACGGATAAGGCTTCAATGCTCGATGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGCGAAATGGGTTGACTTTGCATCCTATGTGCTTTCCAGAAGGCTTGCAGCCACTGCAGTTGTCTCAGATGGGCATGGAAGGAAGTGAAAGAAACAGGTCTACCCCTTTAAACATGACAGCTACTCTGCCTCTCCACCAAGAGAACCCCTTGCACTACACATCCAATCTACCTAACAAGCACATTCTGCCAAATCAGCCATCAGCACCATATCCTTCATTTATTAACAACCCAGAAACGAAACCTCTTCAACACCAAGGAGGATCTTCTGAGCCAATACGCGGGGAAGACATTTTGCATTACCAGCAACCAAGTGCTATCCATTCAGATGCCAATACTCTAGGTGGTTCTCAAGTTGTGAAAGAATTCGAGTCAGGCACAACAGTTTCACTCTCCTTTGACACGCAAACATGTGAACCATGCATCGGCATTGGCAGAAGAGATGAGTCAGCAGTGATCATAAGAAATAGTGAGGCCAACATTGTTGTTACATCCCAGTTAAGTAGTAGGTAA 840 0.4333 MFFFYRNTVGSQLNTVTPTCVTFSFFREGVEAFAEEVPTKPVPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLTLHPMCFPEGLQPLQLSQMGMEGSERNRSTPLNMTATLPLHQENPLHYTSNLPNKHILPNQPSAPYPSFINNPETKPLQHQGGSSEPIRGEDILHYQQPSAIHSDANTLGGSQVVKEFESGTTVSLSFDTQTCEPCIGIGRRDESAVIIRNSEANIVVTSQLSSR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00610 279 Coils Coil 91 111 - -
Phac2g00610 279 FunFam Basic helix-loop-helix transcription factor 47 110 - -
Phac2g00610 279 CDD bHLH_AtPIF_like 53 115 IPR047265 -
Phac2g00610 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 113 IPR036638 GO:0046983
Phac2g00610 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 101 IPR011598 GO:0046983
Phac2g00610 279 Pfam Helix-loop-helix DNA-binding domain 56 102 IPR011598 GO:0046983
Phac2g00610 279 Gene3D - 47 111 IPR036638 GO:0046983
Phac2g00610 279 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 36 194 IPR031066 -
Phac2g00610 279 MobiDBLite consensus disorder prediction 50 64 - -
Phac2g00610 279 MobiDBLite consensus disorder prediction 37 64 - -
Phac2g00610 279 SMART finulus 58 107 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00610 Phac-Chr2 3324081 3327683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00610 52 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 86.747 5.21e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g00610 HLH 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00610 - - vum:124831111 439.113