Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00596 ATGACTCACAACTCAGAGAACAGTAGCACCAGCTTCGATAATGATTTTGAATGTGATGGTGCAGATGGTTCTAGAATCTTGCATTCCTGGAACCACCGGAACCTTGATTCTGGACATGAAGGTGGTGGTAGATCGGAGGAATTAGCATGTACTGTGCCGCAGAGTGAGGAAACTGTGAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTCCCGAGGGTTGATTACTTGCAGAGGCTGAGGAGTGGGAAGTTGGACTTGGGTGTTAGGAGGGATGCACTTGATTGGATTTGGAAGGCTCATGCTTATTTTGGCCTTGGACCCTTGAGTTTTTGTTTGGCTGTGAACTACTTGGATCGCTTCCTATCGGTTTTTGACTTACCGAAAGGTGTAAGTTGGACGGTGCAATTGTTAGCTGTAGCTTGCTTGTCAATTGCAGCTAAAATGGACGAGATTAGAGTGCCTCAATCTGTAGATTTACAGGTTGGGGATCCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTACTGGTATTAAGCAAGTTGAGATGGAAAATGTGTGCATTAACTCCTTATTCCTTCATAGACTACTTCCTTAGCAAGATCACTTGTGAGAAGCACCCAACAAAATCATCCATTGCAATATCAGTGCAGCTCATCCTCAGTATAATCAGAGGTATCGATTTCTTGGAATTCCGGCCTTCTGAAATTGCTGCCGCGGTGGCAATTTCTGTTTTAGGAGAATCACAAGCGAAAGATATCGATAAGTCCATTGCTGATCTCTTTATAGTGGAGAAGGGTAGAGTTCTTAAGTGTGTTGAATTGATAAGAGATCTGTCCTTGAACAATGTTGCTGCTGGTGTAGGCAGCAAGGTGCCTCATGTGCCCCAAAGTCCTATGGGGGTGATGGATGCTGCTGGGTGCTTAAGCTATAAGAGTGATGAATTAACAGTTGGGTCATGTCTAAATTCTTCACATGATAGTCCAAATCCAAACACTAAGAGTAGCAAAGGAGATGGACCTTCTAATGGAACCTCCAAGTGA 1050 0.4381 MTHNSENSSTSFDNDFECDGADGSRILHSWNHRNLDSGHEGGGRSEELACTVPQSEETVRAMVEREREHFPRVDYLQRLRSGKLDLGVRRDALDWIWKAHAYFGLGPLSFCLAVNYLDRFLSVFDLPKGVSWTVQLLAVACLSIAAKMDEIRVPQSVDLQVGDPKFVFEAKTIQKMELLVLSKLRWKMCALTPYSFIDYFLSKITCEKHPTKSSIAISVQLILSIIRGIDFLEFRPSEIAAAVAISVLGESQAKDIDKSIADLFIVEKGRVLKCVELIRDLSLNNVAAGVGSKVPHVPQSPMGVMDAAGCLSYKSDELTVGSCLNSSHDSPNPNTKSSKGDGPSNGTSK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00596 349 SUPERFAMILY Cyclin-like 50 188 IPR036915 -
Phac2g00596 349 SMART cyclin_7 94 182 IPR013763 -
Phac2g00596 349 FunFam D6-type cyclin 185 276 - -
Phac2g00596 349 FunFam D2/4-type cyclin 72 184 - -
Phac2g00596 349 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Phac2g00596 349 SMART Cyclin_C_2 191 313 IPR004367 -
Phac2g00596 349 MobiDBLite consensus disorder prediction 322 349 - -
Phac2g00596 349 Gene3D - 72 189 - -
Phac2g00596 349 PANTHER CYCLINS 38 280 IPR039361 -
Phac2g00596 349 Pfam Cyclin, C-terminal domain 192 285 IPR004367 -
Phac2g00596 349 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Phac2g00596 349 Gene3D - 61 277 - -
Phac2g00596 349 CDD CYCLIN_AtCycD-like_rpt2 192 278 - -
Phac2g00596 349 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00596 Phac-Chr2 3109196 3112106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00596 54 259 Core Cell Cycle Gene Families AT5G65420 61.538 9.96e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00596 K18810 - gmx:100794010 522.316