Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00592 ATGGAATTCGAGGATCAAGAGGACCAAGAGGAGGAGCAGTGTATGAGTGCCGCAGCTTTCGACCCCACCCGGATGAAGGTTCCGCTCGGCCCGGAGGCCGTCATGGCGGCGCAGCCAGTCAGAAGCAGCACCAACGGCGGCTCCGGGAGGGCGCGCTACAGAGAGTGTCTCAAGAACCACGCTGTCGGCATCGGGGGCCACGCGCTTGACGGCTGCGGCGAGTTCATGGCGGCGGGGACGGAGGGTTCCCTCGACGCGCTCAAATGTGCCGCCTGCAGCTGCCACCGCAACTTTCACCGCAAGGAGAGCGACGGGGCCGGCGCATCCGTCGGCGGTGGCGACCCGTTCTTGGTTTCGCACCACCACCTGCACCACCCTCCGCCGCCGCAGTTCGCGGCGTACTACCGGACCCCGACTGGGTACCTTCAGGTGGGGGGGCAGGCACGCGTTACTGGGACGCTGGCGCTGCCGTCGACGTCCGGCGGCGGCGGGACGCAGAGCACTCGGGAGGACCAGGAGGACGTTTCGAACCCGAGTGCAGGAGGAACGGGGTCCAAGAAACGGTTCAGAACAAAGTTCACGCAGGAGCAAAAGGACAAAATGCTTGAACTTGCTGAAAAACTAGGGTGGAGGATTCAGAAACACGACGAGGGTGTGGTCCAAGCCTTCTGCAACGAAACCGGGGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTCGTTTGTTACAATGGTGGTGGTGGTGACGCGTTTGGAACCTTTTTTTTCTGGTGGATGGTGATGATGATATCAGATATATATAGGTGA 822 0.6071 MEFEDQEDQEEEQCMSAAAFDPTRMKVPLGPEAVMAAQPVRSSTNGGSGRARYRECLKNHAVGIGGHALDGCGEFMAAGTEGSLDALKCAACSCHRNFHRKESDGAGASVGGGDPFLVSHHHLHHPPPPQFAAYYRTPTGYLQVGGQARVTGTLALPSTSGGGGTQSTREDQEDVSNPSAGGTGSKKRFRTKFTQEQKDKMLELAEKLGWRIQKHDEGVVQAFCNETGVKRHVLKVWMHNNKHTLVCYNGGGGDAFGTFFFWWMVMMISDIYR* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00592 273 MobiDBLite consensus disorder prediction 153 191 - -
Phac2g00592 273 NCBIfam homeobox domain, ZF-HD class 186 242 IPR006455 -
Phac2g00592 273 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 53 102 IPR006456 -
Phac2g00592 273 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 52 102 IPR006456 -
Phac2g00592 273 Gene3D - 171 247 - -
Phac2g00592 273 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 245 - -
Phac2g00592 273 Pfam ZF-HD protein dimerisation region 51 103 IPR006456 -
Phac2g00592 273 MobiDBLite consensus disorder prediction 153 184 - -
Phac2g00592 273 FunFam Zinc-finger homeodomain protein 2 172 246 - -
Phac2g00592 273 SUPERFAMILY Homeodomain-like 174 244 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00592 Phac-Chr2 3080939 3082006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00592 1 248 ZF-HD Transcription Factor Family AT4G24660 46.850 1.28e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac2g00592 ZF-HD_dimer 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00592 - - gmx:100795063 381.719