Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00583 ATGGAAGAAGCAATGAGGCGTCTCAACGGTGTGGCTCCGATTCTCGGATCCGACCCGAAAGAGTCAGCTGTCGGTGAAAACCCTAAACGGTCCACCGCACTCAACAAGAGGACTTTAAGAGAAGACGGCGGCGGAGCCATGAGGTATCGTGGCGTGAGGCGCAGGCCGTGGGGACGTTACGCCGCCGAGATTAGAGACCCTCAGTCGAAGGAGCGACGGTGGCTGGGAACCTTCGATACCGCGGAGGAAGCAGCCTGCGCCTACGACTGCGCCGCCAGAGCCATGCGCGGTCTCAAGGCTCGCACTAACTTCGTGTACCCAACTTCTCCGCAAGCTTCTTCCGCCACCACCGAACACTTCTTTCATTCTTTTAATAATAACAACTTCACCAAACACTCTCCGTCACTACCCTTCACCAACCACCGTAGCCGCCACTCAACCGGTTCCGCCATGTGCTTTGACCACCCTAGCGCCGTTGACTTTTCCTATTCCAACCCGCGAAACCCTTCTTCCACACTCAATATGCTTCTCCTTCGCGACCTCATTAACTCTTCCTCAAATAACCCTTCTCTGCTTTCTTCTTCCACCCACAACTTCCACGACCAATTCTACAACAAGGGTGCTTCTACTTTTTCGTCGTTACCAACTGTTTCTTCTTCTTCGTCACCTCTTATTCCTAGTTATTCGGTGAATTATCCTTTTGAAGGCTCTTCGTCTGTTAATGTGAACACCCTATGCGGAACTAATTTCACTGATAAAGGTGATGATGATAGCGGGTCTGGATTTTTCTCTCGAGAGTCTTCGGATTCGGGATTGTTGGAAGAGATAGTTAACAAGTTCTTGCCCAAAACGAAGGCCAGTAAGTGCGAGAGTTTGCCAAAAATGGAGGGTTTTCGAAACCCTCAGGAGTCCCTTCTTCCTTCACTTATTTCTGAATCAACACTTGTTTCCACCGTGCAATGCTCTGATGACACGAAAAAAGGGTTTCAGAAGAATGAGAGTTTCGGTGTTTCTTTTGATCATCAGGGTTTTCCCATGCAGAAATTTGACAGCTTTAATGGGTTTGATAGCGTGCAGCGTATGGTTCTGGGGAATGAACAAACCATGACGAATCATGCAGAGAATTGCATCGTTGAAGATGTTTTTCAGTACCAAGAGCTTCTTAATTCTTTTGCAATAAGGATGCAAAATGCTTAG 1197 0.4829 MEEAMRRLNGVAPILGSDPKESAVGENPKRSTALNKRTLREDGGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPQASSATTEHFFHSFNNNNFTKHSPSLPFTNHRSRHSTGSAMCFDHPSAVDFSYSNPRNPSSTLNMLLLRDLINSSSNNPSLLSSSTHNFHDQFYNKGASTFSSLPTVSSSSSPLIPSYSVNYPFEGSSSVNVNTLCGTNFTDKGDDDSGSGFFSRESSDSGLLEEIVNKFLPKTKASKCESLPKMEGFRNPQESLLPSLISESTLVSTVQCSDDTKKGFQKNESFGVSFDHQGFPMQKFDSFNGFDSVQRMVLGNEQTMTNHAENCIVEDVFQYQELLNSFAIRMQNA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00583 398 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Phac2g00583 398 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Phac2g00583 398 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Phac2g00583 398 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Phac2g00583 398 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Phac2g00583 398 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Phac2g00583 398 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Phac2g00583 398 MobiDBLite consensus disorder prediction 1 39 - -
Phac2g00583 398 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 31 213 - -
Phac2g00583 398 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Phac2g00583 398 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00583 Phac-Chr2 2973844 2975193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00583 47 365 AP2-EREBP Transcription Factor Family AT1G24590 37.117 1.94e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00583 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00583 - - vum:124821082 650.973