Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00575 ATGTTTGACTTTAAGCGTGCGTGGTTGGTTCCACTTTTGAGTGGCTTTTCACGATTTACCGAGAAGCTAGCAGTTATAAACTTATATAGCATTGGGCTACGAGGTTGCTGTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACGCTATACAATTCTCTTCTACTGCAGGATATATCGTTTTTTGACAATGAAACGGTAGGTGATTTAACAAGTAGGCTTGGGGCTGATTGTCAACAAGTGTCAAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAACTTTCTTCAGGGTGGAGGTTCATTAATCTACTTGTTGATTTTATCTTGGCCACTTGGTTTATGTACATTGGTGATATGCTCCATATTAGCAGCAGTTATGTTACGCTATGGAAGTTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCGGCAAATGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTACGAGTTTATGGAACAGAAGAAGAAGAACATGGAAGGTATAAATGGTGGCTGGGGAAATTAGCTGACATCAGCTTGCGACAAAGTGCTGCTTATGGAGTTTGGAATTTTAACTTTAACATCCTTTATCATTCAACTCAGGTTATTGCTGTGCTATTTGGAGGAATGTCTATTCTAGCGGGTCATATCACAGCTGAGAAACTTACCAAGTTTATTCTATACAGTGAATGGTTAATCTACTCTACCTGGTGGGTCGGAGATAATATATCCAATTTGATGCAATCAGTTGGGGCTAGTGAAAAAGTATTTCATTTAATGGATCTCTCCCCTAGTAGCCAATTCATAGAAAGAGGTATAAAGTTGCAGAGGTTAATGGGGCGTATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCGAGGCCAACGGTATCTGTAGTGCAACATGTAAGCTTTGTTGTCCATCCTGGTGAGGTGGTTGCAATAGTTGGACTTAGCGGTAGTGGAAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCAGATTTTGGTAGATGATGTCCCTATTAAAGACTTGGACATCATGTGGTGGAGAGAGAGAATTGGATTTGTGGGCCAGGAACCCAAACTCTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTAGAGATGTAAAGCAGGAGGATATTGAATGGGCTGCAAAGCAAGCCTATGCCCATGACTTTATCTCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGAGGACAAAAGCAGCGAATTGCTATTGCTAGGGCCCTTCTTAGAGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCGCTTGATGCTGAAAGTGAGCATAATGTCAAGGGTGTTCTTCGATCTGTGAGAAGTGATTCTGCAACCAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCAGCTGACAGGATTGTGGTGATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAGCTTCTCTTAAAAGATGGTTTGTATGCAAGGCTAACTAGGAAACAGGCTGATGCCATGGCATGA 1611 0.4115 MFDFKRAWLVPLLSGFSRFTEKLAVINLYSIGLRGCCFGIANMILVKRMRETLYNSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNFLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGSYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEEHGRYKWWLGKLADISLRQSAAYGVWNFNFNILYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLSPSSQFIERGIKLQRLMGRIEFLNVSFHYPSRPTVSVVQHVSFVVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDDVPIKDLDIMWWRERIGFVGQEPKLFRMDISSNIRYGCRDVKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARALLRDPKILILDEATSALDAESEHNVKGVLRSVRSDSATRSVIVIAHRLSTIQAADRIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00575 536 Pfam ABC transporter 312 458 IPR003439 GO:0005524
Phac2g00575 536 CDD ABC_MTABC3_MDL1_MDL2 293 531 - -
Phac2g00575 536 SMART AAA_5 320 507 IPR003593 GO:0016887
Phac2g00575 536 Gene3D ABC transporter type 1, transmembrane domain 35 290 IPR036640 GO:0005524|GO:0016020
Phac2g00575 536 Pfam ABC transporter transmembrane region 24 244 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g00575 536 CDD ABC_6TM_TAP 3 267 - -
Phac2g00575 536 ProSitePatterns ABC transporters family signature. 430 444 IPR017871 GO:0005524|GO:0016887
Phac2g00575 536 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 293 530 IPR003439 GO:0005524
Phac2g00575 536 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 23 259 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g00575 536 FunFam Multidrug ABC transporter ATP-binding protein 285 535 - -
Phac2g00575 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 531 IPR027417 -
Phac2g00575 536 SUPERFAMILY ABC transporter transmembrane region 23 275 IPR036640 GO:0005524|GO:0016020
Phac2g00575 536 PANTHER ABC TRANSPORTER B FAMILY 23 528 IPR039421 -
Phac2g00575 536 Gene3D - 291 532 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00575 Phac-Chr2 2916634 2927476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00575 48 534 Calmodulin-binding Proteins AT2G36910 34.600 1.79e-75 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00575 - - vra:106777591 951.814