Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00573 ATGGTCCACAACAGTATACACACTCCTCTCAAGCTCCCACCGTTATCCCAACCCCATCTTCCTCTTCCCACGCGCTTCACCGCCATGTCTCTTCTACTCGCTCGCACCCCACTTTCTACACTTCCTCCAATTCCTCACCACCACTTCAACACCAACCTTCTAATCGCACCCTCTCAGAAGCGCTTCCCTCTCACTGCAGGGCCAATTCTTCTCTTTGCTCCCCGCCGCATTCTAGCATCACCGCCTCTGAAGTGTGCCTCCATCAACGGAGTCTCCGTTCATAACAATCATCAAGCTTCCAGAGAACAAGTCTACGCCGGCGAGTTACTTGAGAGGATTCGTAAATGGCTCGACTTTTTGCCGTCGATTCTTCCCGGCGGACGTTGGTGGGACTTCTCCGAGGACGTCGACGTTCAGCTGGTGACGCAGCCGGTGACCGTGTGGCGCGCGCTAGGCAAAATGTGGGAGCTTGTCGCGCGTGACAGATGGGTCATCTTCGCTGCCTTCTCTGCTCTCATTGTTGCTGCAGTTTCGGAGATTTCTATTCCGCATTTTTTGACGGCGTCCATCTTCTCGGCACAGGCTGCGGACCTTACTGTTTTTCATCGGAATGTTCGCGTGTTGGTTCTGTTGTGCGTGACTTCGGGAATATGCAGTGGGCTACGAGGTTGCTGTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACGCTATACAATTCTCTTCTACTGCAGGATATATCGTTTTTTGACAATGAAACGGTAGGTGATTTAACAAGTAGGCTTGGGGCTGATTGTCAACAAGTGTCAAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAACTTTCTTCAGGGTGGAGGTTCATTAATCTACTTGTTGATTTTATCTTGGCCACTTGGTTTATGTACATTGGTGATATGCTCCATATTAGCAGCAGTTATGTTACGCTATGGAAGTTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCGGCAAATGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTACGAGTTTATGGAACAGAAGAAGAAGAACATGGAAGGTATAAATGGTGGCTGGGGAAATTAGCTGACATCAGCTTGCGACAAAGTGCTGCTTATGGAGTTTGGAATTTTAACTTTAACATCCTTTATCATTCAACTCAGGTTATTGCTGTGCTATTTGGAGGAATGTCTATTCTAGCGGGTCATATCACAGCTGAGAAACTTACCAAGTTTATTCTATACAGTGAATGGTTAATCTACTCTACCTGGTGGGTCGGAGATAATATATCCAATTTGATGCAATCAGTTGGGGCTAGTGAAAAAGTATTTCATTTAATGGATCTCTCCCCTAGTAGCCAATTCATAGAAAGAGGTATAAAGTTGCAGAGGTTAATGGGGCGTATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCGAGGCCAACGGTATCTGTAGTGCAACATGTAAGCTTTGTTGTCCATCCTGGTGAGGTGGTTGCAATAGTTGGACTTAGCGGTAGTGGAAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCAGATTTTGGTAGATGATGTCCCTATTAAAGACTTGGACATCATGTGGTGGAGAGAGAGAATTGGATTTGTGGGCCAGGTTTATGTCTCCAGCATAGATCAAATTTAG 1722 0.4535 MVHNSIHTPLKLPPLSQPHLPLPTRFTAMSLLLARTPLSTLPPIPHHHFNTNLLIAPSQKRFPLTAGPILLFAPRRILASPPLKCASINGVSVHNNHQASREQVYAGELLERIRKWLDFLPSILPGGRWWDFSEDVDVQLVTQPVTVWRALGKMWELVARDRWVIFAAFSALIVAAVSEISIPHFLTASIFSAQAADLTVFHRNVRVLVLLCVTSGICSGLRGCCFGIANMILVKRMRETLYNSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNFLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGSYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEEHGRYKWWLGKLADISLRQSAAYGVWNFNFNILYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLSPSSQFIERGIKLQRLMGRIEFLNVSFHYPSRPTVSVVQHVSFVVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDDVPIKDLDIMWWRERIGFVGQVYVSSIDQI* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00573 573 Pfam ABC transporter 500 565 IPR003439 GO:0005524
Phac2g00573 573 SUPERFAMILY ABC transporter transmembrane region 153 463 IPR036640 GO:0005524|GO:0016020
Phac2g00573 573 CDD ABC_6TM_TAP 168 455 - -
Phac2g00573 573 Pfam ABC transporter transmembrane region 167 432 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac2g00573 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 565 IPR027417 -
Phac2g00573 573 PANTHER ABC TRANSPORTER B FAMILY 160 564 IPR039421 -
Phac2g00573 573 FunFam ABC transporter B family member 26, chloroplastic 147 466 - -
Phac2g00573 573 Gene3D ABC transporter type 1, transmembrane domain 148 467 IPR036640 GO:0005524|GO:0016020
Phac2g00573 573 Gene3D - 471 570 IPR027417 -
Phac2g00573 573 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 166 447 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00573 Phac-Chr2 2916634 2927476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00573 236 572 Calmodulin-binding Proteins AT2G36910 26.648 1.04e-28 120