Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00550 ATGGATCCTCTAACAACACACGCCCATTCTCTTCCACCTCCTTTCCACGCAGGAAGAGATCTCCACCTGCACCACCAACACCAGTTTCACTCCTTACAACAAAACACGGAAGACGAACAAAGCGGAAGCAGCGGAGGCCTAAACATGGCTCACAAAAGAGAACGTGAAGAAAACAGAACCACCAACAGCAACAACAGTGAAGGAAAGGAAGGAGGAGGTGGCGGCTCCGGCGAAACCGAGATGTCAAGAAGACCTCGCGGAAGACCCGCGGGATCCAAGAACAAGCCCAAACCCCCAATCATCATCACGCGCGACAGCGCCAACGCGCTCAAAACTCACGTCATGGAAGTCGCCGACGGCTGTGATATCGTCGACAGCGTCTCCACCTTCGCCCGCCGCCGCCAGCGAGGCGTTTGCATCATGAGCGGAACCGGAACCGTCACCAATGTCACCCTGCGCCAACCCGCTTCTTCCGGCGCCGTCGTCACGCTCCACGGAAGGTTCGAGATCTTGTCCCTCGCCGGATCCTTCCTCCCGCCTCCTGCGCCGCCCGCCGCCACCGGTTTGACGATATACCTAGCTGGAGGACAGGGGCAGGTAGTAGGAGGAAGCGTGGTTGGCGCACTCATTGCTTCGGGGCCTGTGGTTATCATGTCAGCTTCGTTCAGCAACGCTGCGTATGAGAGACTTCCGTTGGAAGATGAAGACCCTTCGATGCCGCTTCAGGGAGGTTCGATTGGGTCACCCGGCGGTGGCGGCGGCGTTGGTCAACCGCAGACACCTCAGCAGCTTCTGGGGGATTCCACTGCTCCTCTTTTTCACGGTTTGAATCCGAATCTTCTGAATTCCGTTCAGATGCCTTCGGAAACGTTCTGGGCAACGGGTCGCTCTCCTTACTGA 900 0.5767 MDPLTTHAHSLPPPFHAGRDLHLHHQHQFHSLQQNTEDEQSGSSGGLNMAHKREREENRTTNSNNSEGKEGGGGGSGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSTFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPSMPLQGGSIGSPGGGGGVGQPQTPQQLLGDSTAPLFHGLNPNLLNSVQMPSETFWATGRSPY* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00550 299 CDD DUF296 111 194 IPR005175 -
Phac2g00550 299 MobiDBLite consensus disorder prediction 27 101 - -
Phac2g00550 299 Gene3D - 110 238 - -
Phac2g00550 299 ProSiteProfiles PPC domain profile profile. 107 244 IPR005175 -
Phac2g00550 299 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 293 IPR014476 GO:0003680
Phac2g00550 299 MobiDBLite consensus disorder prediction 49 63 - -
Phac2g00550 299 FunFam AT-hook motif nuclear-localized protein 110 237 - -
Phac2g00550 299 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 236 - -
Phac2g00550 299 MobiDBLite consensus disorder prediction 28 47 - -
Phac2g00550 299 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 224 IPR005175 -
Phac2g00550 299 PIRSF ESCAROLA 18 298 IPR014476 GO:0003680
Phac2g00550 299 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00550 Phac-Chr2 2754154 2756794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00550 1 299 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.101 3.77e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00550 - - gmx:100781436 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00550 2 2754154 2756794 Phac2g00550 2 2754154 2756794 ECH