Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g00540 | ATGAGAAGACACCGTGCTATTCATCTCTCTCATGCTCTACTGTGCACCGTTTTTTGTTGTCTTGTGACGGCTTCTGCAGTGACTGAGAAGGAGATTTTGCTTGAATTCAAAGGAAACATAACGGACGATCCACGCGCTAGCTTGAGTTCGTGGGTTTCAAGTGGGAACCCGTGCAACGATTACAAAGGTGTTTCGTGTAACTCTGAAGGTTTTGTGGAGAGAATCGTACTATGGAACACTAGCTTGGGAGGGGTGTTATCCTCGTCACTTTCGGGGTTGAAGAGATTGAGGATATTGACGTTGTTCGGGAACCGTTTCTCGGGTGATATTCCAGAAGGGTATGGTGATCTTCAGTCACTGTGGAAGATCAATTTGAGTTCCAATGCTTTATCTGGTTCGATCCCTGAGTTCATCGGTGACTTGCCTAGCATTCGGTTTCTAGATTTATCCAAGAATGGCTTCACTGGGCAGATACCTTCGGCTTTGTTTCGGTACTGCTACAAAACAAAGTTCGTTTCTCTTTCTCATAACAACCTCGCCGGTTCAATTCCTGCCTCCTTGGTGAACTGCTCTAACCTTGAAGGGTTTGATTTTTCCTTCAACAACCTTAGCGGGGTTGTCCCTTCGCGACTTTGTGGCATTCCAAGGTTGTCATATGTGTCGCTGAGAAGCAATGCCTTGTCAGGGAGCGTGCAGGAGCTCATTTCCTCATGCCAAAGTCTGGAACATTTGGATTTTGGAAGTAATAGATTCACTGATTTGGCTCCATTCAGTGTCCTTGGAATGCCAAATCTTACCTATTTCAATTTATCGTATAATGGGTTTGGAGGACATATTCCTGAGATCAGTACCTGTAGTGGGAGATTGCAAATCTTTGATGCTTCAGGGAATTTTTTGGATGGGGAGATTCCCTCCAGCATAACAAAATGCAAGAGCCTAAAGCTTTTGGCGTTGGAGTTGAATAGGCTGGAGGGGAATATCCCAGTGAATATTCAGGAATTGCGAGGACTAATAGTTTTCAAATTGGGTAATAATTCCATTGGTGGAATGATCCCCAAGGGCTTTGGCAACGTTGAGCTTCTTGAATTGCTGGATTTGCACAATCTGAACCTCGTTGGCCAAATTCCTGATGATATAAGCAATTGCAAGTTTCTTCTTGGGCTGGACTTTTCTGGCAATAAATTAGAAGGTGAGATTCCTCAGACTCTTTACAACTTGACAAATCTGAAATCCCTTAACCTACAACATAACCAGCTTAATGGAAGCATCCCCCAAAGCCTAGGAAACCTATTAAGGATTCAATACCTAGATCTGTCACATAATTCACTTTCTGGCCCAATCCCTACTTCCCTTGGAAATTTAAATAACTTGACACATTTTGATCTCTCATTCAATAATCTGTCTGGTTTCATTCCTGAGATTGCAAACATACAGCGTTTTGGGGCATCTGCATTTTCCAATAATCCTTTTCTCTGTGGTCGTCCTTTGGACACCCCTTGCTTGGTAAACGGAGCTTCATCACCTTCATCTCCTGGGAAGGCTAAAGTTCTAAGCACCTCAGCAATTGTTGCAATTGTCGCTGCAGCTGTAATTCTTGCCGGGGTTTGTTTGGTGACCATCATGAATATTATGGCACGTGATAGAGAAAAAGAAGAACCGATTATGATTGTTGAGAGCACACCACTTGGATCAACAGAATCAAATCTTATAATTGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACCAAAACATTGCTTGATAAAGAGTCTTTGATAGGTGGTGGATCAATTGGTACAGTCTACCGAACTGATTTTGAAAGCGGGATCTCAATTGCAGTGAAGAAGCTCGAGACTATGGGAAGGATCAGAAACCAGGAGGAATTTGAGCATGAAATTGGGAGACTAGGCAACCTTCAACACCCTAATTTAGTTGCTTTTCAAGGTTATTATTGGTCCTCTTCAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGGAATCTCTATGATAATCTACATGGGTTGGGCTATGCTGGAACCAGCACTAGTAGAGGAAATAGGGAACTATATTGGTCCAGAAGGTTTCAAATTGCAGTGGGAACCGCAAGAGCCCTTGCTTATCTCCACCATGACTGCAGACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATGACAACTATGAAGCTAAGTTGTCTGATTATGGATTAGGAAAGTTACTTCCCATTTTGGATAATTATGGTCTGACCAATTTCCACAATGCTGTGGGATATGTTGCACCAGAGTTGGCTCAAGGCCTGAGGCAGAGTGAGAAATGTGATGTTTACAGTTTTGGAGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTGGAAAGTCCAACCACAAATGAGGTGGTGGTCTTGTGTGAATATGTAAGAGGTTTGTTAGAAACTAGTTCAGCTTCAGATTGCTTTGACAGAAATTTACTGGGCTTTACCGAGAACGAATTAATTCAGGTTATGAGATTGGGACTAATTTGTACTTCGGAGGATCCTTTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAATCCATTAGAAATGGATTGGATTCCCATTAA | 2655 | 0.426 | MRRHRAIHLSHALLCTVFCCLVTASAVTEKEILLEFKGNITDDPRASLSSWVSSGNPCNDYKGVSCNSEGFVERIVLWNTSLGGVLSSSLSGLKRLRILTLFGNRFSGDIPEGYGDLQSLWKINLSSNALSGSIPEFIGDLPSIRFLDLSKNGFTGQIPSALFRYCYKTKFVSLSHNNLAGSIPASLVNCSNLEGFDFSFNNLSGVVPSRLCGIPRLSYVSLRSNALSGSVQELISSCQSLEHLDFGSNRFTDLAPFSVLGMPNLTYFNLSYNGFGGHIPEISTCSGRLQIFDASGNFLDGEIPSSITKCKSLKLLALELNRLEGNIPVNIQELRGLIVFKLGNNSIGGMIPKGFGNVELLELLDLHNLNLVGQIPDDISNCKFLLGLDFSGNKLEGEIPQTLYNLTNLKSLNLQHNQLNGSIPQSLGNLLRIQYLDLSHNSLSGPIPTSLGNLNNLTHFDLSFNNLSGFIPEIANIQRFGASAFSNNPFLCGRPLDTPCLVNGASSPSSPGKAKVLSTSAIVAIVAAAVILAGVCLVTIMNIMARDREKEEPIMIVESTPLGSTESNLIIGKLVLFSKSLPSKYEDWEAGTKTLLDKESLIGGGSIGTVYRTDFESGISIAVKKLETMGRIRNQEEFEHEIGRLGNLQHPNLVAFQGYYWSSSMQLILSEFVPNGNLYDNLHGLGYAGTSTSRGNRELYWSRRFQIAVGTARALAYLHHDCRPPILHLNIKSSNILLDDNYEAKLSDYGLGKLLPILDNYGLTNFHNAVGYVAPELAQGLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETSSASDCFDRNLLGFTENELIQVMRLGLICTSEDPLRRPSMAEVVQVLESIRNGLDSH* | 885 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g00540 | 884 | SMART | LRR_typ_2 | 141 | 165 | IPR003591 | - | |
Phac2g00540 | 884 | SMART | LRR_typ_2 | 406 | 430 | IPR003591 | - | |
Phac2g00540 | 884 | SMART | LRR_typ_2 | 238 | 261 | IPR003591 | - | |
Phac2g00540 | 884 | SMART | LRR_typ_2 | 262 | 285 | IPR003591 | - | |
Phac2g00540 | 884 | SMART | LRR_typ_2 | 454 | 476 | IPR003591 | - | |
Phac2g00540 | 884 | FunFam | probable LRR receptor-like serine/threonine-protein kinase IRK | 673 | 883 | - | - | |
Phac2g00540 | 884 | CDD | STKc_IRAK | 602 | 877 | - | - | |
Phac2g00540 | 884 | Gene3D | Phosphorylase Kinase; domain 1 | 567 | 672 | - | - | |
Phac2g00540 | 884 | Pfam | Protein kinase domain | 598 | 872 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac2g00540 | 884 | SUPERFAMILY | Protein kinase-like (PK-like) | 597 | 875 | IPR011009 | - | |
Phac2g00540 | 884 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 573 | 672 | - | - | |
Phac2g00540 | 884 | SUPERFAMILY | L domain-like | 164 | 492 | - | - | |
Phac2g00540 | 884 | SUPERFAMILY | L domain-like | 73 | 161 | - | - | |
Phac2g00540 | 884 | ProSiteProfiles | Protein kinase domain profile. | 596 | 884 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac2g00540 | 884 | Pfam | Leucine rich repeat N-terminal domain | 29 | 67 | IPR013210 | - | |
Phac2g00540 | 884 | Gene3D | Ribonuclease Inhibitor | 168 | 503 | IPR032675 | - | |
Phac2g00540 | 884 | Gene3D | Ribonuclease Inhibitor | 26 | 167 | IPR032675 | - | |
Phac2g00540 | 884 | ProSiteProfiles | Leucine-rich repeat profile. | 240 | 261 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | Pfam | Leucine rich repeat | 95 | 153 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | Pfam | Leucine rich repeat | 215 | 274 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | Gene3D | Transferase(Phosphotransferase) domain 1 | 673 | 883 | - | - | |
Phac2g00540 | 884 | Pfam | Leucine Rich Repeat | 433 | 454 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | Pfam | Leucine Rich Repeat | 408 | 430 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | ProSiteProfiles | Leucine-rich repeat profile. | 408 | 431 | IPR001611 | GO:0005515 | |
Phac2g00540 | 884 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g12460 | 26 | 164 | - | - | |
Phac2g00540 | 884 | PANTHER | OS05G0588300 PROTEIN | 204 | 305 | - | - | |
Phac2g00540 | 884 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g12460 | 165 | 505 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g00540 | Phac-Chr2 | 2699444 | 2708359 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g00540 | 25 | 883 | Receptor kinase-like Gene Family | AT1G62950 | 65.593 | 0.0 | 1100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-1 | Phac2g00540 | Pkinase | 2.4e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g00540 | - | - | gmx:100800970 | 1550.41 |