Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00529 ATGGCTTCAACTCTTCAACCTTCTACCTTGTTGTTTGTTTTTACAATGAAGTTCATGTTCATTCTCATGTTCATGGGAGACCAGGCAATAGCTGCGGGGATATTTCGACCCAGTCAATGGGCTCTTGCCCATGCCACCTTTTACGGTGATGAGACTGCTTCTGCCACTATGGGAGGAGCATGCGGGTACGGGAATTTATTTCAAAATGGTTACGGCACAGATACTGTGGCTTTAAGTTCTACGTTGTTCAACAATGGATATGCGTGTGGAACTTGTTATCAAATAAAATGTTACCAATCAAGTGCGTGTTATAAGAATGTAGCTTTTACCACAGTGACTGCCACCAATCTTTGCCCTCCTAACTGGGCACAACCCTCCAATAACGGAGGCTGGTGCAACCCACCACGAGTCCATTTTGACATGGCCAAACCCGCTTTCATGAAAATTGCGCAGTGGAAAGCTGGCATCGTCCCTGTTATGTACCGCAGAGTGCCATGTGTAAGGAAGGGAGGGCTTCGATTCACTTTTCAAGGAAATGGGTACTGGCTTTTGGTGTACATGATGAACGTGGGAGGTGGAGGAGATATTTCAAGCATGTCGGTGAAAGGAAGCAGAACTGGGTGGATCAGCATGAGCCACAACTGGGGTGCTTCATATCAAGCATTTGCAACTCTTGGTGGCCAACCTCTTTCTTTCAGGATTACTTCATACACCACCAAGGAAACTATCATTGCATGGAATGTTGCTCCTTCAAACTGGAACGTGGGACTAACTTATTCCACCACTGTTAACTTCCGCTGA 801 0.4607 MASTLQPSTLLFVFTMKFMFILMFMGDQAIAAGIFRPSQWALAHATFYGDETASATMGGACGYGNLFQNGYGTDTVALSSTLFNNGYACGTCYQIKCYQSSACYKNVAFTTVTATNLCPPNWAQPSNNGGWCNPPRVHFDMAKPAFMKIAQWKAGIVPVMYRRVPCVRKGGLRFTFQGNGYWLLVYMMNVGGGGDISSMSVKGSRTGWISMSHNWGASYQAFATLGGQPLSFRITSYTTKETIIAWNVAPSNWNVGLTYSTTVNFR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00529 266 PRINTS Expansin signature 146 159 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 170 182 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 70 84 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 247 263 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 182 203 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 129 146 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin signature 110 120 IPR002963 GO:0009664
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 247 261 IPR007118 GO:0005576
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 154 170 IPR007118 GO:0005576
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 39 54 IPR007118 GO:0005576
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 79 97 IPR007118 GO:0005576
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Phac2g00529 266 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Phac2g00529 266 CDD DPBB_EXPA_N 39 166 - -
Phac2g00529 266 PANTHER EXPANSIN-A15 23 261 IPR002963 GO:0009664
Phac2g00529 266 SUPERFAMILY Barwin-like endoglucanases 39 189 IPR036908 -
Phac2g00529 266 Pfam Expansin C-terminal domain 173 250 IPR007117 -
Phac2g00529 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 181 261 IPR007117 -
Phac2g00529 266 Gene3D - 172 266 IPR036749 -
Phac2g00529 266 Gene3D - 28 166 IPR036908 -
Phac2g00529 266 SMART dpbb_1 75 161 IPR007112 -
Phac2g00529 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 171 IPR007112 -
Phac2g00529 266 SUPERFAMILY PHL pollen allergen 168 260 IPR036749 -
Phac2g00529 266 Pfam Lytic transglycolase 75 161 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00529 Phac-Chr2 2656362 2658043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00529 19 266 Expansin Gene Family AT1G12560 68.952 5.80e-129 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00529 - - gmx:100807807 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00529 2 2656362 2658043 Phac2g00529 2 2656362 2658043 ECH