Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00519 ATGGCTCATTTGGTTTACGGTGAAACTCCATCTTTTGGAGCTTCACACCATGGACAGGCTCAGCAAACTGTTCCGTTTCCAACCACTGCAACATCCTTAAAGATTCTGCTCTTACATGGCAACTTGGAAATATGGGTCAACGAGGCCAGAAACCTTCCCAACATGGACATGTTTCACAAGAAAACGGGAGAAATGGTTTCCATGTTGTCCCGAAGACTTGGCGGCAAAATCGAAGGCGTCATGTCCAAAACTGCAACCAGTGATCCCTATGTTACAGTGTCTGTGGCGGGTGCTGTGATTGCCAGAACTTTTGTCATCAGAAACATGGAGAACCCCGTTTGGACGCAGCGTTTCAATGTCCCCGTTGCCCACCTTGCTTCTGAAGTCCACTTCGTTGTAAAGGACAGTGATATTGTGGGTTCCCAGATTATTGGAGCAGTGGGTATTCCAGTTGAACCGTTATGTAGTGGCGCAAGAGTTGATGGCTTTTTCCCCATCATTAGTACTAATGGAAAACCATGTAAAGGTGGAGCAATGTTGAGTTTATCCATTCAGTACACCCCTGTTGAAAAGGTGCCTCTTTATAGCCATGGAGTAGGTGCTGGTCCTGATTATCAAGGGGTACCTGACACATATTTTCCCCTTAGGAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCATGAAGGGTGCCTTCCCAGTTTGAAGGTGGATGGGGATGTGAATTATAAGCATGAAAGTTGTTGGCACCAAATCTTTGATGCAATAAGTAAGGCTCGTCGATTGGTTTACATTGTTGGGTGGTCTGTGTACTACGATGTTAGTCTCATTCGGGATATGGGTGATGGAAAGGCTCACACTTTAGGTGAACTTCTCAAAGCAAAATCACGGGAAGGTGTGAGAGTGTTGCTCCTTGTGTGGGATGATCCCACTTCTGGAAGCTTTCTTGGATACAAAACGGTTGGATATATGAAAACCCATGATGAGGACACTCGCCATTTTTTCAAGCACTCTTCGGTACAGGTGCTTCTTTGCCCACGAGCTGGTGGAAAGGGACATAGCTTTCTCAAAACGCAGGAAGCTGGAACAATCTATTCCCATCATCAGAAAACAGTCATTGTAGATGCTGACGCAGGTCACCATAAAAGAAAGATAGTAGCTTTCATCGGAGGTCTTGATTTATGTGTGGGTCGATATGATACCCCAAACCATTCCCTCTTTAGGACTTTGCAGACAACACATAAAAATGACTATCATAATCCTAACTTTGAGGGACCTATCACTGACTGTCCAAGACAACCGTGGCATGATTTGCATTCCAAAGTTGATGGTCCAGCAGCATATGACATCCTCACCAATTTTGAGGAGCGTTGGTTGAGGGCTTTAAAAATGCATAGATTGCGAAAGATGAAAAGTTCGCTTGATGATTCATTGCTAAAAATTGATAGAATCGATGACATTGTTGGCATTGATAAAGTTTCTTGCCAAAATGAAGATGATCAAGAGACTTGGCATACCCAGGTCTTCCGATCCATTGATTCCAATTCTGTGAAAGGATTTCCAAAGCAATCACAAGATGCTATAAGAAGGAACTTGGTTTGTGGAAAGAATGTGCTAATAGACATGAGCATACATTCAGCTTATGTCAAGGCAATTCGAGCAGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATATAATTGGGATTCTTACATAGACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTGAAAATAGCCAGCAAAATCAAACAGCATGAGAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGAGTGCCTAAAAGTAAAACCACTCAGCGGATTCTCTTTTGGCAGTTCAAAACCATGCAAATGATGTATGAAACGGTTTACAAGGCCTTACAGGAGGCTGGGCTTGACAATCAGTATGAGCCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGAAAACGAACATGTTTCAAATGTTACAAAAACTACTGAAGAACACACACCTCAGGCACTCACTAAAAAGAACCGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTGCTGGGGTCTGCAAACATTAACCAGAGATCCATGGAAGGCACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAAAAAAGCAATCTAAACCTCGTGGACAGGTGCATGGTTATAGAATGTCACTGTGGAGCGAACACATAGGAAGTGTGGAAGCATGTTTTGAGGAACCAGAGAGGCTTGAGTGTGTAAGGCGGATAAGGTCATTGAGTGAGTCTAACTGGAGACAGTATGCAGCAGATGAGGTAACTGAAATGAAAAGCCATTTATTAAAATATCCTCTTGAAGTTGATTCAAAGGGCAAGGTGAAGCCTCTTTCTGGCTGTGAGACATTCCCAGATGTTGGTGGGAACATAAGTGGCACTTTCACAGTACTCAAAGAAAATCTCACCATCTGA 2562 0.4266 MAHLVYGETPSFGASHHGQAQQTVPFPTTATSLKILLLHGNLEIWVNEARNLPNMDMFHKKTGEMVSMLSRRLGGKIEGVMSKTATSDPYVTVSVAGAVIARTFVIRNMENPVWTQRFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEPLCSGARVDGFFPIISTNGKPCKGGAMLSLSIQYTPVEKVPLYSHGVGAGPDYQGVPDTYFPLRKGGKVTLYQDAHVHEGCLPSLKVDGDVNYKHESCWHQIFDAISKARRLVYIVGWSVYYDVSLIRDMGDGKAHTLGELLKAKSREGVRVLLLVWDDPTSGSFLGYKTVGYMKTHDEDTRHFFKHSSVQVLLCPRAGGKGHSFLKTQEAGTIYSHHQKTVIVDADAGHHKRKIVAFIGGLDLCVGRYDTPNHSLFRTLQTTHKNDYHNPNFEGPITDCPRQPWHDLHSKVDGPAAYDILTNFEERWLRALKMHRLRKMKSSLDDSLLKIDRIDDIVGIDKVSCQNEDDQETWHTQVFRSIDSNSVKGFPKQSQDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYIDLGANNLIPMEIALKIASKIKQHERFSVYIVIPMWPEGVPKSKTTQRILFWQFKTMQMMYETVYKALQEAGLDNQYEPQDYLNFFCLGNREIPENEHVSNVTKTTEEHTPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPRGQVHGYRMSLWSEHIGSVEACFEEPERLECVRRIRSLSESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLSGCETFPDVGGNISGTFTVLKENLTI* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00519 853 Gene3D C2 domain 35 183 IPR035892 -
Phac2g00519 853 FunFam Phospholipase D delta 241 479 - -
Phac2g00519 853 SUPERFAMILY Phospholipase D/nuclease 526 774 - -
Phac2g00519 853 PIRSF PLD_plant 27 853 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phac2g00519 853 PANTHER PHOSPHOLIPASE D 32 842 IPR015679 -
Phac2g00519 853 SMART pld_4 365 400 IPR001736 GO:0003824
Phac2g00519 853 SMART pld_4 699 726 IPR001736 GO:0003824
Phac2g00519 853 Pfam Phospholipase D C terminal 774 843 IPR024632 -
Phac2g00519 853 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 33 191 IPR035892 -
Phac2g00519 853 SUPERFAMILY Phospholipase D/nuclease 206 466 - -
Phac2g00519 853 CDD C2_plant_PLD 36 187 - -
Phac2g00519 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Phac2g00519 853 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Phac2g00519 853 Gene3D Endonuclease Chain A 489 753 - -
Phac2g00519 853 FunFam Phospholipase D 513 745 - -
Phac2g00519 853 Gene3D Endonuclease Chain A 237 481 - -
Phac2g00519 853 SMART C2_3c 41 163 IPR000008 -
Phac2g00519 853 Pfam C2 domain 40 166 IPR000008 -
Phac2g00519 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Phac2g00519 853 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Phac2g00519 853 Pfam Phospholipase D Active site motif 700 726 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00519 Phac-Chr2 2602798 2608478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00519 32 853 Phospholipase D Gene Family (Wang group) AT2G42010 67.335 0.0 1225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00519 K01115 - gmx:100786241 1580.46