Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00506 ATGAAGTTTTTCACATCTACTCACGACCACGACTCAGAAGCATCATGCGAAACAGGTTCCCCGACAAGAGTGCAGAGCAGTGGGTGTTCAGACGAGGAAGTGATACTAGCGTCGTCGCGGCCCAAGAAGCGAGCGGGGCGAAGAGTGTTCAAGGAGACCAGGCACCCCGTGTACCGGGGAGTGCGGCGGAGGAACAACAACAAGTGGGTCTGCGAGATGCGAGTTCCCAACAACAACTCGCGGATTTGGCTCGGCACCTACCGCACGCCCGAAATGGCGGCGAGGGCGCACGACGTTGCGGCCCTCGCGCTCAGGGGGAAGTCGGCCTGCCTCAATTTCGCCGACTCCGTGTGGCGCCTCACGGTGCCTGACACCACCGACGCGGAGGAGATACGGCGGGCGGCGGTGGAGGCTGCTGAGGCATTTGCGGCTGAGGATGTGAACCGACAGCAGAGGAGTGAAGAAATTGAAGAGCCCCTGCGGCTGCAACAGGAAGAGGCGATGTCGGAAGTTGAAGAGTTGCAGGAATTGCTTCTGCGAATTGCGAATGAGCCTTTGATGTCTCCTCCTCCTTGTGCGAGAGATTGCAGTGGCTGGAATGACGTGGAGATATTTGATGCTGAGGTTTCACTGTGGAACTTTTCAATTTGA 651 0.5776 MKFFTSTHDHDSEASCETGSPTRVQSSGCSDEEVILASSRPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNSRIWLGTYRTPEMAARAHDVAALALRGKSACLNFADSVWRLTVPDTTDAEEIRRAAVEAAEAFAAEDVNRQQRSEEIEEPLRLQQEEAMSEVEELQELLLRIANEPLMSPPPCARDCSGWNDVEIFDAEVSLWNFSI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00506 216 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Phac2g00506 216 MobiDBLite consensus disorder prediction 1 32 - -
Phac2g00506 216 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 213 IPR045277 GO:0003700
Phac2g00506 216 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 SUPERFAMILY DNA-binding domain 57 116 IPR016177 GO:0003677
Phac2g00506 216 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 Coils Coil 164 184 - -
Phac2g00506 216 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 MobiDBLite consensus disorder prediction 17 32 - -
Phac2g00506 216 MobiDBLite consensus disorder prediction 1 16 - -
Phac2g00506 216 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Phac2g00506 216 FunFam Ethylene-responsive transcription factor 2 56 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00506 Phac-Chr2 2533600 2534567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00506 30 214 AP2-EREBP Transcription Factor Family AT1G12610 48.558 3.29e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g00506 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00506 - - gmx:100789097 272.322