Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00488 ATGAACGGCGGCGAGGAGAGAGAAACTGCAGCGTTCCGAGCTCTGGCGGATCGGTGCCGGAGCCTCGAGGAGAAGCAGGCCAAGCTGAGGGAGGAATTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGCACGATAACGATGACAATAACGAGGTCATTGCTGATTCAACAACCCTCGGTTTTCCCTCCGGTTACTTCTTCTCCGGAAGTCCCTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCGGAGTTCCCTCCGCCGAGATCGTATACTGGAATCAGGCGGCCGAAACTCTGTATGGATGGAAAGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAACTGCTGAGGACAATTATGCATCTCTTCAAAAAATTCTGGAAAGGGTGGTTTCAGGAGTTCCATGGTCTGGGAAGTTTCCTTTCAAGAAGAAATCTGGTGAAGTAATTATGGCATTAGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATGCGGCTATAGTAAAATCTACAAATTCAGAAAATCGAACTTACAAATCTGGTAACAATAGCCAATCTGGAGTACAGAGGTTAAACTTTAAAAGAATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATCTGTTTCCAATCTGGCATCAAAGCTTCTCCCACTGCTGCATAGTACTGATGACACAGTTTCCGGGAACACTTCAACAGGTGATGAAAAGCTAGAGAAGCGTGACATATATGAAACAAAACCTCATTCCAGACATCTCCGTAAAGGAAACACAATTGTCACAGAGGCCTCCGAGAAGAATGAGTCTACTGCAGAATTTGGTCAACCTTCTAAAATTGCAGCCAAGCTTCAAACTGGGGTACGTGCAAAATATGGAAAGGATAATGGAAATATAAAAAATAATTGTACAGATGATAATTCAGGAAGCAATAGAATGAATTATGAAAATGTTTCATCTGGAGGCTTAGTGGCATTAAATCGATATCAGGATGTCGTTAATGGAGCAGACAAAGAACAAAATCTTCAAAAATGTAATTCTTCACCTGCTATGAAGAGAGCAGATACAACAGCGTGTGCGTGTAGAGCTTCCACTGTTTCCAAAGATTATTCTGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTTTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCACAGGGGATAATGAGTCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAGGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCTCCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACTTTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTCTCTCTCTCCCCGACACACATGTAG 1959 0.4262 MNGGEERETAAFRALADRCRSLEEKQAKLREEFDELLQKKLTVRHDNDDNNEVIADSTTLGFPSGYFFSGSPYATVLKCMGHAVHVLGVPSAEIVYWNQAAETLYGWKDYEIIGQRVAKVLTAEDNYASLQKILERVVSGVPWSGKFPFKKKSGEVIMALVTKTPLYEDGELVGVITVSSDAAIVKSTNSENRTYKSGNNSQSGVQRLNFKRIQWPPRPTIAPMPQIASSVSNLASKLLPLLHSTDDTVSGNTSTGDEKLEKRDIYETKPHSRHLRKGNTIVTEASEKNESTAEFGQPSKIAAKLQTGVRAKYGKDNGNIKNNCTDDNSGSNRMNYENVSSGGLVALNRYQDVVNGADKEQNLQKCNSSPAMKRADTTACACRASTVSKDYSGDEVQKQQEGSQLPSLRESIDKHESLSSTGDNESNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVSLSPTHM* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00488 652 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 256 641 - -
Phac2g00488 652 SUPERFAMILY Protein kinase-like (PK-like) 417 644 IPR011009 -
Phac2g00488 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Phac2g00488 652 Pfam Protein tyrosine and serine/threonine kinase 439 644 IPR001245 GO:0004672|GO:0006468
Phac2g00488 652 ProSitePatterns Protein kinases ATP-binding region signature. 445 466 IPR017441 GO:0005524
Phac2g00488 652 MobiDBLite consensus disorder prediction 391 429 - -
Phac2g00488 652 NCBIfam PAS domain S-box protein 92 181 IPR000014 -
Phac2g00488 652 ProSiteProfiles Protein kinase domain profile. 439 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00488 652 Coils Coil 12 39 - -
Phac2g00488 652 MobiDBLite consensus disorder prediction 391 407 - -
Phac2g00488 652 CDD STKc_MAP3K-like 445 647 - -
Phac2g00488 652 Pfam PAS domain 89 181 IPR000014 -
Phac2g00488 652 ProSiteProfiles PAS repeat profile. 91 141 IPR000014 -
Phac2g00488 652 Gene3D Phosphorylase Kinase; domain 1 427 516 - -
Phac2g00488 652 Gene3D Transferase(Phosphotransferase) domain 1 517 650 - -
Phac2g00488 652 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 181 IPR035965 -
Phac2g00488 652 SMART serkin_6 439 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00488 652 CDD PAS 93 181 IPR000014 -
Phac2g00488 652 Gene3D PAS domain 69 205 - -
Phac2g00488 652 FunFam Serine/threonine-protein kinase isoform 1 430 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00488 Phac-Chr2 2451359 2458196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00488 3 645 MAP Kinase Kinase Kinase AT4G23050 42.736 5.89e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac2g00488 PK_Tyr_Ser-Thr 8.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00488 - - vra:106777922 1153.66