Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00487 ATGAACGGCGGCGAGGAGAGAGAAACTGCAGCGTTCCGAGCTCTGGCGGATCGGTGCCGGAGCCTCGAGGAGAAGCAGGCCAAGCTGAGGGAGGAATTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGCACGATAACGATGACAATAACGAGGTCATTGCTGATTCAACAACCCTCGGTTTTCCCTCCGGTTACTTCTTCTCCGGAAGTCCCTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCGGAGTTCCCTCCGCCGAGATCGTATACTGGAATCAGGCGGCCGAAACTCTGTATGGATGGAAAGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAACTGCTGAGGACAATTATGCATCTCTTCAAAAAATTCTGGAAAGGGTGGTTTCAGGAGTTCCATGGTCTGGGAAGTTTCCTTTCAAGAAGAAATCTGGTGAAGTAATTATGGCATTAGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATGCGGCTATAGTAAAATCTACAAATTCAGAAAATCGAACTTACAAATCTGGTAACAATAGCCAATCTGGAGTACAGAGGTTAAACTTTAAAAGAATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATCTGTTTCCAATCTGGCATCAAAGCTTCTCCCACTGCTGCATAGTACTGATGACACAGTTTCCGGGAACACTTCAACAGGTGATGAAAAGCTAGAGAAGCGTGACATATATGAAACAAAACCTCATTCCAGACATCTCCGTAAAGGAAACACAATTGTCACAGAGGCCTCCGAGAAGAATGAGTCTACTGCAGAATTTGGTCAACCTTCTAAAATTGCAGCCAAGCTTCAAACTGGGGATGTCGTTAATGGAGCAGACAAAGAACAAAATCTTCAAAAATGTAATTCTTCACCTGCTATGAAGAGAGCAGATACAACAGCGTGTGCGTGTAGAGCTTCCACTGTTTCCAAAGATTATTCTGAGGCTACGACTATGGTGACAGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTTTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCACAGGGGATAATGAGTCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAGGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCTCCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACTTTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTCGTAGGCTTTGTGGACAGACGACTGGACCTTCCGGATGACCTTGATCCCTATGTTGCCTCAATCATCAATGATTGCTGGCGAAGTGATCCAGAGCAACGCCCATCATTTGAAGAGCTGATCCAGAGAACGTTGTTCCTCGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTGCAGAATCATAA 2022 0.4377 MNGGEERETAAFRALADRCRSLEEKQAKLREEFDELLQKKLTVRHDNDDNNEVIADSTTLGFPSGYFFSGSPYATVLKCMGHAVHVLGVPSAEIVYWNQAAETLYGWKDYEIIGQRVAKVLTAEDNYASLQKILERVVSGVPWSGKFPFKKKSGEVIMALVTKTPLYEDGELVGVITVSSDAAIVKSTNSENRTYKSGNNSQSGVQRLNFKRIQWPPRPTIAPMPQIASSVSNLASKLLPLLHSTDDTVSGNTSTGDEKLEKRDIYETKPHSRHLRKGNTIVTEASEKNESTAEFGQPSKIAAKLQTGDVVNGADKEQNLQKCNSSPAMKRADTTACACRASTVSKDYSEATTMVTGDEVQKQQEGSQLPSLRESIDKHESLSSTGDNESNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVVGVVGFVDRRLDLPDDLDPYVASIINDCWRSDPEQRPSFEELIQRTLFLVNRVTAVSIRRIAES* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00487 673 Pfam Protein tyrosine and serine/threonine kinase 403 653 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 PRINTS Tyrosine kinase catalytic domain signature 477 490 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 PRINTS Tyrosine kinase catalytic domain signature 563 573 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 PRINTS Tyrosine kinase catalytic domain signature 582 604 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 PRINTS Tyrosine kinase catalytic domain signature 516 534 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 PRINTS Tyrosine kinase catalytic domain signature 626 648 IPR001245 GO:0004672|GO:0006468
Phac2g00487 673 Gene3D Phosphorylase Kinase; domain 1 391 480 - -
Phac2g00487 673 Gene3D PAS domain 69 205 - -
Phac2g00487 673 CDD STKc_MAP3K-like 409 654 - -
Phac2g00487 673 MobiDBLite consensus disorder prediction 356 391 - -
Phac2g00487 673 MobiDBLite consensus disorder prediction 356 371 - -
Phac2g00487 673 Coils Coil 12 39 - -
Phac2g00487 673 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 208 656 - -
Phac2g00487 673 NCBIfam PAS domain S-box protein 92 181 IPR000014 -
Phac2g00487 673 ProSiteProfiles PAS repeat profile. 91 141 IPR000014 -
Phac2g00487 673 Gene3D Transferase(Phosphotransferase) domain 1 482 663 - -
Phac2g00487 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Phac2g00487 673 SMART serkin_6 403 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00487 673 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 181 IPR035965 -
Phac2g00487 673 CDD PAS 93 181 IPR000014 -
Phac2g00487 673 ProSiteProfiles Protein kinase domain profile. 403 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00487 673 FunFam PAS domain-containing protein tyrosine kinase family protein 481 669 - -
Phac2g00487 673 FunFam Serine/threonine-protein kinase isoform 1 394 481 - -
Phac2g00487 673 SUPERFAMILY Protein kinase-like (PK-like) 391 662 IPR011009 -
Phac2g00487 673 ProSitePatterns Protein kinases ATP-binding region signature. 409 430 IPR017441 GO:0005524
Phac2g00487 673 Pfam PAS domain 89 181 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00487 Phac-Chr2 2451359 2458196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00487 63 654 MAP Kinase Kinase Kinase AT3G06640 39.362 1.08e-141 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac2g00487 PK_Tyr_Ser-Thr 9.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00487 - - vra:106777922 1186.02