Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00484 ATGAACGGCGGCGAGGAGAGAGAAACTGCAGCGTTCCGAGCTCTGGCGGATCGGTGCCGGAGCCTCGAGGAGAAGCAGGCCAAGCTGAGGGAGGAATTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGCACGATAACGATGACAATAACGAGGTCATTGCTGATTCAACAACCCTCGGTTTTCCCTCCGGTTACTTCTTCTCCGGAAGTCCCTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCGGAGTTCCCTCCGCCGAGATCGTATACTGGAATCAGGCGGCCGAAACTCTGTATGGATGGAAAGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAACTGCTGAGGACAATTATGCATCTCTTCAAAAAATTCTGGAAAGGGTGGTTTCAGGAGTTCCATGGTCTGGGAAGTTTCCTTTCAAGAAGAAATCTGGTGAAGTAATTATGGCATTAGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATGCGGCTATAGTAAAATCTACAAATTCAGAAAATCGAACTTACAAATCTGGTAACAATAGCCAATCTGGAGTACAGAGGTTAAACTTTAAAAGAATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATCTGTTTCCAATCTGGCATCAAAGCTTCTCCCACTGCTGCATAGTACTGATGACACAGTTTCCGGGAACACTTCAACAGGTGATGAAAAGCTAGAGAAGCGTGACATATATGAAACAAAACCTCATTCCAGACATCTCCGTAAAGGAAACACAATTGTCACAGAGGCCTCCGAGAAGAATGAGTCTACTGCAGAATTTGGTCAACCTTCTAAAATTGCAGCCAAGCTTCAAACTGGGGATGTCGTTAATGGAGCAGACAAAGAACAAAATCTTCAAAAATGTAATTCTTCACCTGCTATGAAGAGAGCAGATACAACAGCGTGTGCGTGTAGAGCTTCCACTGTTTCCAAAGATTATTCTGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTTTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCACAGGGGATAATGAGTCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAGGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCTCCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACTTTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTCTCTCTCTCCCCGACACACATGTAG 1830 0.435 MNGGEERETAAFRALADRCRSLEEKQAKLREEFDELLQKKLTVRHDNDDNNEVIADSTTLGFPSGYFFSGSPYATVLKCMGHAVHVLGVPSAEIVYWNQAAETLYGWKDYEIIGQRVAKVLTAEDNYASLQKILERVVSGVPWSGKFPFKKKSGEVIMALVTKTPLYEDGELVGVITVSSDAAIVKSTNSENRTYKSGNNSQSGVQRLNFKRIQWPPRPTIAPMPQIASSVSNLASKLLPLLHSTDDTVSGNTSTGDEKLEKRDIYETKPHSRHLRKGNTIVTEASEKNESTAEFGQPSKIAAKLQTGDVVNGADKEQNLQKCNSSPAMKRADTTACACRASTVSKDYSGDEVQKQQEGSQLPSLRESIDKHESLSSTGDNESNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVSLSPTHM* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00484 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Phac2g00484 609 Pfam Protein tyrosine and serine/threonine kinase 396 601 IPR001245 GO:0004672|GO:0006468
Phac2g00484 609 MobiDBLite consensus disorder prediction 348 364 - -
Phac2g00484 609 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 181 IPR035965 -
Phac2g00484 609 Gene3D PAS domain 69 205 - -
Phac2g00484 609 CDD STKc_MAP3K-like 402 604 - -
Phac2g00484 609 Pfam PAS domain 89 181 IPR000014 -
Phac2g00484 609 SMART serkin_6 396 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00484 609 Coils Coil 12 39 - -
Phac2g00484 609 ProSiteProfiles PAS repeat profile. 91 141 IPR000014 -
Phac2g00484 609 Gene3D Transferase(Phosphotransferase) domain 1 474 607 - -
Phac2g00484 609 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 203 598 - -
Phac2g00484 609 SUPERFAMILY Protein kinase-like (PK-like) 374 601 IPR011009 -
Phac2g00484 609 MobiDBLite consensus disorder prediction 348 385 - -
Phac2g00484 609 Gene3D Phosphorylase Kinase; domain 1 384 473 - -
Phac2g00484 609 CDD PAS 93 181 IPR000014 -
Phac2g00484 609 ProSiteProfiles Protein kinase domain profile. 396 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00484 609 ProSitePatterns Protein kinases ATP-binding region signature. 402 423 IPR017441 GO:0005524
Phac2g00484 609 NCBIfam PAS domain S-box protein 92 181 IPR000014 -
Phac2g00484 609 FunFam Serine/threonine-protein kinase isoform 1 387 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00484 Phac-Chr2 2451359 2458196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00484 4 602 MAP Kinase Kinase Kinase AT4G23050 43.713 2.15e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac2g00484 PK_Tyr_Ser-Thr 7.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00484 - - vra:106777922 1055.82