Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00480 ATGAACGGCGGCGAGGAGAGAGAAACTGCAGCGTTCCGAGCTCTGGCGGATCGGTGCCGGAGCCTCGAGGAGAAGCAGGCCAAGCTGAGGGAGGAATTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGCACGATAACGATGACAATAACGAGGTCATTGCTGATTCAACAACCCTCGGTTTTCCCTCCGGTTACTTCTTCTCCGGAAGTCCCTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCGGAGTTCCCTCCGCCGAGATCGTATACTGGAATCAGGCGGCCGAAACTCTGTATGGATGGAAAGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAACTGCTGAGGACAATTATGCATCTCTTCAAAAAATTCTGGAAAGGGTGGTTTCAGGAGTTCCATGGTCTGGGAAGTTTCCTTTCAAGAAGAAATCTGGTGAAGTAATTATGGCATTAGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATGCGGCTATAGTAAAATCTACAAATTCAGAAAATCGAACTTACAAATCTGGTAACAATAGCCAATCTGGAGTACAGAGGTTAAACTTTAAAAGAATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATCTGTTTCCAATCTGGCATCAAAGCTTCTCCCACTGCTGCATAGTACTGATGACACAGTTTCCGGGAACACTTCAACAGGTGATGAAAAGCTAGAGAAGCGTGACATATATGAAACAAAACCTCATTCCAGACATCTCCGTAAAGGAAACACAATTGTCACAGAGGCCTCCGAGAAGAATGAGTCTACTGCAGAATTTGGTCAACCTTCTAAAATTGCAGCCAAGCTTCAAACTGGGGATGTCGTTAATGGAGCAGACAAAGAACAAAATCTTCAAAAATGTAATTCTTCACCTGCTATGAAGAGAGCAGATACAACAGCGTGTGCGTGTAGAGCTTCCACTGTTTCCAAAGATTATTCTGAGGCTACGACTATGGTGACAGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTTTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCACAGGGGATAATGAGTCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAGGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCTCCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACTTTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTCTCTCTCTCCCCGACACACATGTAG 1851 0.436 MNGGEERETAAFRALADRCRSLEEKQAKLREEFDELLQKKLTVRHDNDDNNEVIADSTTLGFPSGYFFSGSPYATVLKCMGHAVHVLGVPSAEIVYWNQAAETLYGWKDYEIIGQRVAKVLTAEDNYASLQKILERVVSGVPWSGKFPFKKKSGEVIMALVTKTPLYEDGELVGVITVSSDAAIVKSTNSENRTYKSGNNSQSGVQRLNFKRIQWPPRPTIAPMPQIASSVSNLASKLLPLLHSTDDTVSGNTSTGDEKLEKRDIYETKPHSRHLRKGNTIVTEASEKNESTAEFGQPSKIAAKLQTGDVVNGADKEQNLQKCNSSPAMKRADTTACACRASTVSKDYSEATTMVTGDEVQKQQEGSQLPSLRESIDKHESLSSTGDNESNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVSLSPTHM* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00480 616 NCBIfam PAS domain S-box protein 92 181 IPR000014 -
Phac2g00480 616 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 181 IPR035965 -
Phac2g00480 616 SUPERFAMILY Protein kinase-like (PK-like) 381 608 IPR011009 -
Phac2g00480 616 Gene3D PAS domain 69 205 - -
Phac2g00480 616 ProSiteProfiles Protein kinase domain profile. 403 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00480 616 CDD STKc_MAP3K-like 409 611 - -
Phac2g00480 616 MobiDBLite consensus disorder prediction 356 391 - -
Phac2g00480 616 MobiDBLite consensus disorder prediction 356 371 - -
Phac2g00480 616 Coils Coil 12 39 - -
Phac2g00480 616 SMART serkin_6 403 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00480 616 Gene3D Phosphorylase Kinase; domain 1 391 480 - -
Phac2g00480 616 ProSiteProfiles PAS repeat profile. 91 141 IPR000014 -
Phac2g00480 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Phac2g00480 616 CDD PAS 93 181 IPR000014 -
Phac2g00480 616 Gene3D Transferase(Phosphotransferase) domain 1 481 614 - -
Phac2g00480 616 FunFam Serine/threonine-protein kinase isoform 1 394 481 - -
Phac2g00480 616 Pfam PAS domain 89 181 IPR000014 -
Phac2g00480 616 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 207 605 - -
Phac2g00480 616 ProSitePatterns Protein kinases ATP-binding region signature. 409 430 IPR017441 GO:0005524
Phac2g00480 616 Pfam Protein tyrosine and serine/threonine kinase 403 608 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00480 Phac-Chr2 2451359 2458196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00480 4 609 MAP Kinase Kinase Kinase AT4G23050 42.547 8.78e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac2g00480 PK_Tyr_Ser-Thr 7.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00480 - - vra:106777922 1075.46