Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00479 ATGGGTAAGGCATCCAAATGGTTTCGCGGCCTTCTCGGTTTCAAAAGGCAAGACTCGCCGTCCGCCGCCGCTCCCAAACCGCCCAAGGAGAAACGGCGGTGGAGCTTCGTCAAGTCCTACCGAGAAAAGGACCATTCCGCCGTCGACCGCCACGCGCCACCCACCAGCGGAGGCCACTCCTCGGGACACGTGGAAAGCGCTGATCCCAACCTCGCAGCACTCGCCACACTCGCCGCTGTCACCGTCGTCGGAGGCGTTTCTCGAGAAGAATGGGCAGCCGTTAAGATTCAAGCCGCGTTTCGAGGCTCTTTGCTACTAACGCGTATCGAGGTGCGTCCAGCGTCACCATCTCCCCCTTTCTCTTCCCTCCGTGTTGCCCTTTTCACCATTAATGTTTTCACTCTCTTCACACACGCAGAGCAACATGCAAATGTAAAAGGAGCATCGCCACCCTGTAATGCAAGGAAAGCCCTTGGAGCGTTAAAAGGATTGGTGAAGCTACAGGCATTGGTGAGGGGTGAGATTGAGAGGAAGCGCACATCAGAATGGCTGCAAAGAGGTCCAGCAAAACCAGACAAATTTGAAAGCCCCATCAGATCCGAGAGCATGAAATATGATCACTCACCATCATTACTCAAGAGAAACAGCTCAAAATCACGCATGCAGATCAATGAATCATGGCATCAACGAAGATCGTGGTCAAGAGGTTGTAGCCTGGACGAAGAAAGATGTTTCAGGATGCTAGAAAATGATTCTGTAAAACCACAGATTGCAACATCAAAGGGTAGAAACCAGTTTTACTCCCCAAGCCATGGTTTGGTCTGTGAAGTTGAGTCTTACAGCCCTCTAAAAACGAAGGAGGAGGTTGAGGAGAACTCATGGTGTGGTGGTGAGAATAGTCCTCGTACTTTGTCTGCCTCTTCTAGAAATGGTGGCTCCAAAAGAAGCCCTTTTACTCCTAGCAAGAGTGATGGGTCAAAGAGCCATGGAAGTGGTTATTCTGAACCTGAGTATCCGAGTTACATGGCATACACTGAATCCTCAATGGCAAAGGTGAGATCCGCGAGTGCTCCAAAGCAGAGGCCCCAATATGAGAGGTCTAGTTCTTCTTCTAACAGGTACTCGGTTCATGATCATGGATTTGGTGACTCCAAATTTGCCACGCAAAGGCTTGCTGCATTACACGCAAACTTCACTAACAAAGCTTACCCTGGTTCTGCTCGGTTGGACAGGCACAAATACTCACATACGTAA 1254 0.5016 MGKASKWFRGLLGFKRQDSPSAAAPKPPKEKRRWSFVKSYREKDHSAVDRHAPPTSGGHSSGHVESADPNLAALATLAAVTVVGGVSREEWAAVKIQAAFRGSLLLTRIEVRPASPSPPFSSLRVALFTINVFTLFTHAEQHANVKGASPPCNARKALGALKGLVKLQALVRGEIERKRTSEWLQRGPAKPDKFESPIRSESMKYDHSPSLLKRNSSKSRMQINESWHQRRSWSRGCSLDEERCFRMLENDSVKPQIATSKGRNQFYSPSHGLVCEVESYSPLKTKEEVEENSWCGGENSPRTLSASSRNGGSKRSPFTPSKSDGSKSHGSGYSEPEYPSYMAYTESSMAKVRSASAPKQRPQYERSSSSSNRYSVHDHGFGDSKFATQRLAALHANFTNKAYPGSARLDRHKYSHT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00479 417 MobiDBLite consensus disorder prediction 17 65 - -
Phac2g00479 417 ProSiteProfiles IQ motif profile. 89 118 IPR000048 GO:0005515
Phac2g00479 417 MobiDBLite consensus disorder prediction 296 330 - -
Phac2g00479 417 Pfam Protein of unknown function (DUF4005) 300 377 IPR025064 -
Phac2g00479 417 MobiDBLite consensus disorder prediction 25 50 - -
Phac2g00479 417 MobiDBLite consensus disorder prediction 291 376 - -
Phac2g00479 417 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Phac2g00479 417 MobiDBLite consensus disorder prediction 347 376 - -
Phac2g00479 417 ProSiteProfiles IQ motif profile. 162 189 IPR000048 GO:0005515
Phac2g00479 417 Pfam IQ calmodulin-binding motif 91 104 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00479 Phac-Chr2 2442565 2445836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00479 1 53 IQD Protein Family AT4G23060 45.161 5.82e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00479 - - pvu:PHAVU_002G154900g 645.58