Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00449 ATGGATGGAAGAGAAGGTATGGGTTTTCCTGGCGGCTCTGCTCCATATTACATGCATCATAGAGGAGGAGGGGTTGGTGGGTCTGGTCCTGGAACTGGAACACCCTCTGGGTTCCAACCACCTTCTGTTTTCAGAGCTTTGTCAAATGTCTCTTCAGGTCCTTCATACTCAGTAGAGGCTAAGCCTCAGTCCCAGCCTCAGCCTCAGCCTCAACGTGGTGGTTTTGGTCATGGCATAAACTTAGGTTCTTCACCTGACGGTGGAGGTGGAATGGCTTCTTCCGGTGAATCTGTGAAAAAGAAAAGAGGGAGGCCAAGGAAGTATGGTCCTGATAGTGGGACTGTTTCCCTGAGACTCTCTCCCTTGTCTGCCACTGCAAATTCCACCCCAGGAACAGGCACTCCCTCGGAGAAACGGCCCAGAGGACGCCCACCTGGAAGTGGAAGGAAGCAACAGCTTGCCACTTTAGGTGAATGGATGAACAATTCTGCAGGACTGGCCTTTTCACCTCATGTTATCACTGTTGGAGTTGGGGAGGACATTGTAGCAAAGTTGTTCTCATTTTCACAGCAGAGGCCAAGGGCTTTGTGCATCTTAACTGGAACTGGAACAGTTTCTTCTGTCACTCTGCGCCAGCCAGCTTCTACTAGCATCAGTGTTTCTTATGAGGGCCGATTTCAAATATTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGAAGGTGGACCACGCAGTAGAACAGGTGGCATGAGTGTTTCCCTTTCTAGTCCTGATGGTCATATTATTGGTGGTGGTGTTGCCAGCCTTATAGCTGCAAGCCCGGTGCAGGTGGTAGTATGCAGTTTTGTATATGGAAGCTCTAAGCCAAAGACTAAACAAGTGACCACTGCTACAAAAGATAGCAGTTGCGAGCCCCAGAGTAGTGACAAGTTACCTTCTCAAGGCAGTGCTCCTAATCAAAACTACTCTTCTCCTGCCACAGGCATGTGGCCTGCTTCATCAAGGCCATTAGAGGTGAAAAGTGCACATCCACACACTGGTATTGACTTGACGCGAGGGTGA 1062 0.4944 MDGREGMGFPGGSAPYYMHHRGGGVGGSGPGTGTPSGFQPPSVFRALSNVSSGPSYSVEAKPQSQPQPQPQRGGFGHGINLGSSPDGGGGMASSGESVKKKRGRPRKYGPDSGTVSLRLSPLSATANSTPGTGTPSEKRPRGRPPGSGRKQQLATLGEWMNNSAGLAFSPHVITVGVGEDIVAKLFSFSQQRPRALCILTGTGTVSSVTLRQPASTSISVSYEGRFQILCLSGSYLVAEEGGPRSRTGGMSVSLSSPDGHIIGGGVASLIAASPVQVVVCSFVYGSSKPKTKQVTTATKDSSCEPQSSDKLPSQGSAPNQNYSSPATGMWPASSRPLEVKSAHPHTGIDLTRG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00449 353 MobiDBLite consensus disorder prediction 32 71 - -
Phac2g00449 353 MobiDBLite consensus disorder prediction 116 135 - -
Phac2g00449 353 CDD DUF296 170 282 IPR005175 -
Phac2g00449 353 MobiDBLite consensus disorder prediction 291 330 - -
Phac2g00449 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 59 320 IPR039605 GO:0003680
Phac2g00449 353 Gene3D - 170 299 - -
Phac2g00449 353 ProSiteProfiles PPC domain profile profile. 165 306 IPR005175 -
Phac2g00449 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 283 IPR005175 -
Phac2g00449 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 168 285 - -
Phac2g00449 353 MobiDBLite consensus disorder prediction 1 151 - -
Phac2g00449 353 PRINTS AT-hook-like domain signature 136 147 IPR017956 GO:0003677
Phac2g00449 353 PRINTS AT-hook-like domain signature 99 109 IPR017956 GO:0003677
Phac2g00449 353 MobiDBLite consensus disorder prediction 291 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00449 Phac-Chr2 2246432 2251144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00449 1 353 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.969 8.29e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00449 - - gmx:100790569 539.265