Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00440 ATGAACATCTTAAACGAGGATCATGGTTTAGTTGATAGAGCTTTTGCCATCCAGTTTGGCAATGAACTCATACCAAATTGGTTTTTGGTTGATGAGGAGAACTATAGATTCATTGTGAAATATAACATGGATCTATATATGCCTAAGTTGACTGGTGGTTGGTCTGAAGTTCGAGAACATTATGGGCTTCCCGGTGGTCACGATCTTCCTGTTGCTTTTGCGAATTACATTCGACAAGGGAGGTTAAAGTATACTGTCCTTCATGGACATAAGACTGAGGTAAAGTGCAAAATTCTCATAAGGGCACCTTCGAAGCCTTCAGTTAAATTCGGGTGTGGATGGAGAGAGTTTTGTCAGAAGCATTCACTTCATGAAGATGACAAGTTGATCTTTGAGGCTAAGAGTGGAGAAACTCCAACTGATATTAAGGTGTTGTTAGTGTTGTAA 447 0.3982 MNILNEDHGLVDRAFAIQFGNELIPNWFLVDEENYRFIVKYNMDLYMPKLTGGWSEVREHYGLPGGHDLPVAFANYIRQGRLKYTVLHGHKTEVKCKILIRAPSKPSVKFGCGWREFCQKHSLHEDDKLIFEAKSGETPTDIKVLLVL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00440 148 SUPERFAMILY DNA-binding pseudobarrel domain 69 134 IPR015300 -
Phac2g00440 148 Gene3D - 65 146 IPR015300 -
Phac2g00440 148 Pfam B3 DNA binding domain 69 136 IPR003340 GO:0003677
Phac2g00440 148 CDD B3_DNA 69 132 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00440 Phac-Chr2 2185931 2186742 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g00440 B3 1.7e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00440 - K12459 pvu:PHAVU_010G055000g 108.997