Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00419 ATGTCTTCTGATCTCTATACTTTTGACATTCCTTTCCCCAGACATTCAGACACAGACAACATGGTCTCCTATGATGCAGATGGAAATCTTATGTTTTTCTCTGACCCTTATTCCTTCCCTTTCCTCACTGCCTCTCCAGTGCATGATGTGCCTCAAGGGTACCCTTCTTTCTTCTCTTTTTCTCCTCAGGAAAAGGAGAGTCTCTGTCATGCTGACCCGGTGCAGCCTCTGTCAAATGGCTCAAATATAAAGTCAGAGTTTAGAAGTTTCTCTGCTTTGCATGGCTCCGAAGTGACAACAAGTGAGGAGTGCCAAATGGTTGTGGATTACTTCCGCAATCACCACTTTCTTTCTCAAACTTGTCATGCATCTGACAGTGCATCCAAGGTAATACAAAGGAGCTTCAGCTGTAACTCTTTTGGTGGGAAACCAGATTTCCCCTTTGAACCTCACCCTGACACTCTCATGGACTCCTCAAATTTTCAATGCCATGCTCTGCTTTCCCCTGAAAACAATTTCTTCATGGGACAAATGAGGAGGGTGTGCAGTACAGGAGATTTACAGAACACCAAAGCAACAGATATGTCTCAAGTGGAGAGCCCCTTGTTGGAGGAGGCATACTTCAAAGTGGGGCGTTACAGTGCCGAAGAAAGAAAGGAAAAAATCTCGAAATACAGAGCGAAGAGAAGCCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACGCTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCTCGCAACGACGAAATCAGCGAGATTCCGAAAGCACTTTCTTCAACTTCAACCACAGAAGAATATGAAGACGAATTCTGGGTTGAATTCATTGAAGGATTAAACGAAGAGGTGATCGGTTAG 894 0.4463 MSSDLYTFDIPFPRHSDTDNMVSYDADGNLMFFSDPYSFPFLTASPVHDVPQGYPSFFSFSPQEKESLCHADPVQPLSNGSNIKSEFRSFSALHGSEVTTSEECQMVVDYFRNHHFLSQTCHASDSASKVIQRSFSCNSFGGKPDFPFEPHPDTLMDSSNFQCHALLSPENNFFMGQMRRVCSTGDLQNTKATDMSQVESPLLEEAYFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKALSSTSTTEEYEDEFWVEFIEGLNEEVIG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00419 297 ProSiteProfiles CCT domain profile. 218 260 IPR010402 GO:0005515
Phac2g00419 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 84 269 IPR045281 GO:0009909
Phac2g00419 297 Pfam CCT motif 218 260 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00419 Phac-Chr2 2102566 2104593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00419 214 265 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 2.98e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac2g00419 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00419 - - pvu:PHAVU_002G158500g 588.571