Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00415 ATGGCTCGACAACTGTGTGAAGAAAAATCATCCACTGGATTTTGCTACTCTGATGTATCACCGGGAAATCCAACGATGCTAGTGAACCAGATCCAAGGCTTCGTGTCAGAGCCGGAGATGTACAACCTCAGCACAGGCATGGAAATGATAGGGTTTCCGAAGAGTGACACCAACGCTGTCATGTGGAGAAGTTTCATCCCCAAACCGGGTCCCTCCTCTTCCAAGACCATCAACGACTCTTCCACCCCTTTCTACCACCATGACTACAACAGCAGCAAGCCTTCAGATTTCACACCCGGGAATATGTCTGAAACAAGTGCCGAGAATCTAATCGTAGGAGCTCACGATTCAGCCCCGTGGCAAGACGACAACAACCATAGCAGGTTTGATGACTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGCCAACGAAAGGCCCAGTCAAGGTCTTTCACTCTCTCTCAGTTCAACCAACCCTTCCACTATCGGGTTGCAGTCTTTTGAGCTACGACAAACAAGCCATCATCCTGATTTTGTTCCCTCGAGTTCCAGAGAAGGGTTCTTTGGAAAACCAGTGAGTGTTCAGCAGCAACAGATGTTACAAGACGGGTATGTGAGTTCTAATTCCAAAGCTGCAAGTGTTTACCAACAAGGACATTTCCTGGTGAAGAACTCCAAGTATTTGGTGCCTGCACAGGATCTTCTCAACGAGTTTTGCAGCCTAGACGCAAAGCAAAGTGAGGCGGGAAAGCCCAAATCGTTGAAGAAGCAGTGGGAAGAGGAAAACAACTGTAGTGGTTCCTTGAAGAAGCCTTCTCTGACCTCTCTCGAGTTCGTTGAATTGCAGAAGAGAAAGACAAAGCTGCTTTCGATGCTGGAAGAGGTTGACAGAAGATACAAGCACTACCGCAATCAGATGAAGAGCGTGGTGTCGTCGTTTGAAACGGTGGCGGGGAACGGTGCTGCCACGGTGTACTCGGCGTTGGCGCTGAAAGCCATGTCGAGACATTTCAAGTGTTTGAAGGATGGGATTTTGGGGCAAATTCAAACAACACGAAAAGCCATGGGAGAGAAAGACCCAGTTGCACCAGGCACAACAAGGGGTGAAACGCCGAGGCTCAAAGTCATTGACCAAGCACTGAGACAACAAAGGGCGTTTCAGCAAATGAGCATGATGGAAACCCATCCTTGGAGACCCCAACGTGGCCTTCCCGAACGTGCTGTTTCGGTTCTTCGGGCTTGGCTTTTTGAGCATTTTCTCCATCCGTACCCAAGCGATGTCGATAAGCATATTCTAGCACGCCAAACCGGTCTCTCGAGAGGCCAGGTACGTTTATATCTTTCTCAAACACATATAGACACCTAA 1365 0.4864 MARQLCEEKSSTGFCYSDVSPGNPTMLVNQIQGFVSEPEMYNLSTGMEMIGFPKSDTNAVMWRSFIPKPGPSSSKTINDSSTPFYHHDYNSSKPSDFTPGNMSETSAENLIVGAHDSAPWQDDNNHSRFDDSSLRCVFPCEANERPSQGLSLSLSSTNPSTIGLQSFELRQTSHHPDFVPSSSREGFFGKPVSVQQQQMLQDGYVSSNSKAASVYQQGHFLVKNSKYLVPAQDLLNEFCSLDAKQSEAGKPKSLKKQWEEENNCSGSLKKPSLTSLEFVELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFETVAGNGAATVYSALALKAMSRHFKCLKDGILGQIQTTRKAMGEKDPVAPGTTRGETPRLKVIDQALRQQRAFQQMSMMETHPWRPQRGLPERAVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRGQVRLYLSQTHIDT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00415 454 SMART prehox3 216 346 IPR006563 -
Phac2g00415 454 Gene3D - 403 449 - -
Phac2g00415 454 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 133 443 - -
Phac2g00415 454 Pfam Associated with HOX 222 344 IPR006563 -
Phac2g00415 454 Pfam Homeobox KN domain 414 447 IPR008422 GO:0003677|GO:0006355
Phac2g00415 454 CDD homeodomain 397 444 IPR001356 GO:0003677
Phac2g00415 454 SUPERFAMILY Homeodomain-like 398 446 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00415 Phac-Chr2 2059264 2064049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00415 138 443 Homeobox Transcription Factor Family AT5G41410 50.877 3.70e-94 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00415 - - gmx:100803088 793.112