Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00406 ATGAGTGGCAAAGGCAAAGAGGAAGAGGGGATTAAGAGGGTTATGATTCACGGAGGTCGATACGTGCAATACAACGTTTATGGAAACTTGTTCGAGCTACCCTCCAAGTATGTCCCTCCGATTCGCCCTATCGGAAGGGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATCAAAAAGATTGGGAACGCCTTTGACAACATCATTGACGCTAAACGGACTTTGAGGGAGATTAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCTATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGACCTTCACCACATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATGTCTTGCACCGAGATCTTAAGCCCAGTAATTTGCTTCTGAATGCGAACTGTGACCTTAAAATTGCTGACTTTGGTTTGGCAAGGGTAACATCTGAAACGGATTTCATGACGGAGTATGTGGTCACCCGGTGGTACCGTGCCCCCGAATTGCTCCTTACTTGTTCGGAGTACACCTCTGCTATTGACGTTTGGTCTGTTGGTTGCATATTTGGTGAAGTTATGACCAGGGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAGTGCTTATAACGGAGGTATGGCTTTGGTGCTTCCGTTTGAAATTACAGGTTTCAGAAGCTTTCTAA 810 0.4457 MSGKGKEEEGIKRVMIHGGRYVQYNVYGNLFELPSKYVPPIRPIGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFNDVYIVYELMDTDLHHIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARVTSETDFMTEYVVTRWYRAPELLLTCSEYTSAIDVWSVGCIFGEVMTREPLFPGKDYVHQLVLITEVWLWCFRLKLQVSEAF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00406 269 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phac2g00406 269 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 254 - -
Phac2g00406 269 Gene3D Phosphorylase Kinase; domain 1 21 121 - -
Phac2g00406 269 SUPERFAMILY Protein kinase-like (PK-like) 41 254 IPR011009 -
Phac2g00406 269 FunFam Mitogen-activated protein kinase 23 132 - -
Phac2g00406 269 SMART serkin_6 38 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00406 269 ProSiteProfiles Protein kinase domain profile. 38 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00406 269 FunFam Mitogen-activated protein kinase 122 257 - -
Phac2g00406 269 Pfam Protein kinase domain 42 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g00406 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Phac2g00406 269 Gene3D Transferase(Phosphotransferase) domain 1 122 254 - -
Phac2g00406 269 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00406 Phac-Chr2 2021060 2025093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00406 3 254 MAP Kinase Gene Family AT4G01370 82.143 3.99e-160 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phac2g00406 Pkinase 1e-61 CL0016